Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 14 studies | 38% ± 18% | |
endothelial cell | 10 studies | 34% ± 16% | |
ciliated cell | 7 studies | 30% ± 17% | |
adipocyte | 7 studies | 25% ± 5% | |
endothelial cell of lymphatic vessel | 6 studies | 38% ± 16% | |
GABAergic neuron | 5 studies | 33% ± 15% | |
glutamatergic neuron | 5 studies | 34% ± 13% | |
cardiac muscle cell | 5 studies | 27% ± 6% | |
club cell | 5 studies | 38% ± 14% | |
type I pneumocyte | 5 studies | 38% ± 14% | |
type II pneumocyte | 5 studies | 43% ± 18% | |
cholangiocyte | 4 studies | 49% ± 22% | |
mesothelial cell | 4 studies | 21% ± 5% | |
Mueller cell | 4 studies | 39% ± 10% | |
retinal cone cell | 4 studies | 68% ± 16% | |
retinal rod cell | 4 studies | 44% ± 16% | |
oligodendrocyte | 4 studies | 23% ± 7% | |
microglial cell | 3 studies | 18% ± 3% | |
epithelial cell | 3 studies | 49% ± 12% | |
squamous epithelial cell | 3 studies | 38% ± 16% | |
hepatocyte | 3 studies | 67% ± 25% | |
retinal pigment epithelial cell | 3 studies | 52% ± 13% | |
ependymal cell | 3 studies | 62% ± 10% | |
fibroblast | 3 studies | 30% ± 17% | |
respiratory goblet cell | 3 studies | 44% ± 15% | |
basal cell | 3 studies | 21% ± 2% | |
neuron | 3 studies | 46% ± 22% | |
mucus secreting cell | 3 studies | 42% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
stomach | 100% | 2671.45 | 358 / 359 | 98% | 14.80 | 279 / 286 |
breast | 100% | 3228.04 | 459 / 459 | 95% | 10.98 | 1065 / 1118 |
kidney | 100% | 4216.51 | 89 / 89 | 95% | 17.77 | 858 / 901 |
pancreas | 100% | 1875.15 | 328 / 328 | 94% | 18.57 | 168 / 178 |
intestine | 96% | 2558.48 | 930 / 966 | 98% | 13.85 | 516 / 527 |
ovary | 100% | 2292.66 | 180 / 180 | 94% | 11.36 | 404 / 430 |
lung | 99% | 1742.96 | 570 / 578 | 94% | 12.02 | 1084 / 1155 |
bladder | 95% | 2072.00 | 20 / 21 | 94% | 13.96 | 473 / 504 |
prostate | 98% | 1611.64 | 241 / 245 | 91% | 7.27 | 455 / 502 |
esophagus | 98% | 3907.39 | 1422 / 1445 | 90% | 15.65 | 164 / 183 |
thymus | 100% | 2514.36 | 653 / 653 | 87% | 9.13 | 525 / 605 |
uterus | 96% | 1151.15 | 164 / 170 | 83% | 11.36 | 379 / 459 |
liver | 100% | 1903.97 | 226 / 226 | 73% | 5.53 | 297 / 406 |
brain | 73% | 711.69 | 1921 / 2642 | 70% | 4.88 | 491 / 705 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.28 | 1 / 1 |
adipose | 100% | 2330.63 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 95% | 2954.55 | 814 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 87% | 827.76 | 1160 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 10.82 | 37 / 45 |
skin | 72% | 1792.19 | 1305 / 1809 | 9% | 0.54 | 43 / 472 |
spleen | 51% | 321.47 | 122 / 241 | 0% | 0 | 0 / 0 |
adrenal gland | 6% | 42.34 | 16 / 258 | 43% | 3.28 | 100 / 230 |
lymph node | 0% | 0 | 0 / 0 | 28% | 1.73 | 8 / 29 |
muscle | 12% | 76.97 | 93 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 9% | 91.58 | 87 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 5% | 0.28 | 4 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0090136 | Biological process | epithelial cell-cell adhesion |
GO_0044331 | Biological process | cell-cell adhesion mediated by cadherin |
GO_0046931 | Biological process | pore complex assembly |
GO_0045218 | Biological process | zonula adherens maintenance |
GO_0005813 | Cellular component | centrosome |
GO_0030054 | Cellular component | cell junction |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005915 | Cellular component | zonula adherens |
GO_0046930 | Cellular component | pore complex |
GO_0070097 | Molecular function | delta-catenin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PLEKHA7 |
Protein name | HCG1992264, isoform CRA_a (PLEKHA7 protein) Pleckstrin homology domain containing A7 Pleckstrin homology domain-containing family A member 7 (PH domain-containing family A member 7) |
Synonyms | hCG_1992264 |
Description | FUNCTION: Required for zonula adherens biogenesis and maintenance . Acts via its interaction with CAMSAP3, which anchors microtubules at their minus-ends to zonula adherens, leading to the recruitment of KIFC3 kinesin to the junctional site . Mediates docking of ADAM10 to zonula adherens through a PDZD11-dependent interaction with the ADAM10-binding protein TSPAN33 . . |
Accessions | E9PL74 ENST00000530489.5 ENST00000532079.1 A0A1B0GUM1 A0A1B0GUN0 ENST00000531066.6 ENST00000528376.5 ENST00000636113.1 Q6IQ23 Q8IUS9 A0A1B0GTN9 ENST00000355661.7 [Q6IQ23-1] E9PKC0 ENST00000698836.1 ENST00000637162.1 ENST00000636090.1 A0A8Q3WLI9 H0YDE2 E9PIK1 ENST00000525581.2 A0A8V8TMS3 E9PN45 ENST00000696749.1 |