Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 8 studies | 34% ± 13% | |
| basal cell | 7 studies | 28% ± 15% | |
| enterocyte | 5 studies | 21% ± 4% | |
| squamous epithelial cell | 3 studies | 50% ± 25% | |
| ciliated cell | 3 studies | 21% ± 4% | |
| keratinocyte | 3 studies | 33% ± 14% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| intestine | 3 studies | 18% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| prostate | 74% | 2314.59 | 181 / 245 | 99% | 75.90 | 497 / 502 |
| pancreas | 68% | 1575.65 | 224 / 328 | 94% | 117.78 | 167 / 178 |
| thymus | 62% | 1278.41 | 402 / 653 | 87% | 36.45 | 529 / 605 |
| stomach | 50% | 1573.59 | 180 / 359 | 97% | 144.46 | 277 / 286 |
| esophagus | 39% | 11669.68 | 557 / 1445 | 99% | 203.55 | 182 / 183 |
| breast | 41% | 1083.98 | 188 / 459 | 97% | 70.15 | 1083 / 1118 |
| intestine | 39% | 2541.76 | 377 / 966 | 98% | 161.40 | 516 / 527 |
| lung | 37% | 862.12 | 216 / 578 | 96% | 101.22 | 1112 / 1155 |
| bladder | 29% | 760.86 | 6 / 21 | 95% | 132.13 | 478 / 504 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 193.15 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 73.36 | 1 / 1 |
| ovary | 0% | 0 | 0 / 180 | 96% | 76.18 | 414 / 430 |
| uterus | 2% | 229.88 | 4 / 170 | 84% | 139.81 | 387 / 459 |
| skin | 72% | 18071.20 | 1302 / 1809 | 11% | 10.89 | 53 / 472 |
| kidney | 0% | 0 | 0 / 89 | 12% | 4.42 | 106 / 901 |
| liver | 0% | 0 | 0 / 226 | 9% | 7.07 | 35 / 406 |
| lymph node | 0% | 0 | 0 / 0 | 3% | 1.73 | 1 / 29 |
| adrenal gland | 0% | 0 | 0 / 258 | 1% | 0.38 | 2 / 230 |
| adipose | 1% | 28.22 | 8 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 0% | 7.13 | 2 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 2.08 | 1 / 929 | 0% | 0 | 0 / 0 |
| blood vessel | 0% | 9.95 | 1 / 1335 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| brain | 0% | 0 | 0 / 2642 | 0% | 0 | 0 / 705 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
| GO_0072659 | Biological process | protein localization to plasma membrane |
| GO_0010669 | Biological process | epithelial structure maintenance |
| GO_0006417 | Biological process | regulation of translation |
| GO_0002934 | Biological process | desmosome organization |
| GO_0051797 | Biological process | regulation of hair follicle development |
| GO_0002159 | Biological process | desmosome assembly |
| GO_0090136 | Biological process | epithelial cell-cell adhesion |
| GO_1902373 | Biological process | negative regulation of mRNA catabolic process |
| GO_0098609 | Biological process | cell-cell adhesion |
| GO_0002718 | Biological process | regulation of cytokine production involved in immune response |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0001533 | Cellular component | cornified envelope |
| GO_0005911 | Cellular component | cell-cell junction |
| GO_0005912 | Cellular component | adherens junction |
| GO_0005737 | Cellular component | cytoplasm |
| GO_0030054 | Cellular component | cell junction |
| GO_0030057 | Cellular component | desmosome |
| GO_0005634 | Cellular component | nucleus |
| GO_0019899 | Molecular function | enzyme binding |
| GO_0045294 | Molecular function | alpha-catenin binding |
| GO_0045296 | Molecular function | cadherin binding |
| GO_0098641 | Molecular function | cadherin binding involved in cell-cell adhesion |
| GO_0050839 | Molecular function | cell adhesion molecule binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | PKP3 |
| Protein name | Plakophilin-3 Plakophilin 3 |
| Synonyms | |
| Description | FUNCTION: May play a role in junctional plaques. |
| Accessions | ENST00000531857.1 ENST00000331563.7 [Q9Y446-1] ENST00000534401.5 E9PKC4 ENST00000525642.1 H0YEY5 Q9Y446 ENST00000527442.5 ENST00000533249.5 E9PQ15 E9PJR7 E9PRW6 ENST00000528036.5 E9PK71 |