Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 25% ± 8% | |
adipocyte | 8 studies | 26% ± 5% | |
GABAergic neuron | 7 studies | 38% ± 18% | |
oligodendrocyte | 7 studies | 25% ± 7% | |
glutamatergic neuron | 6 studies | 45% ± 23% | |
fibroblast | 6 studies | 23% ± 7% | |
astrocyte | 6 studies | 31% ± 11% | |
epithelial cell | 5 studies | 24% ± 9% | |
interneuron | 5 studies | 39% ± 22% | |
microglial cell | 4 studies | 21% ± 4% | |
oligodendrocyte precursor cell | 4 studies | 28% ± 8% | |
endothelial cell of lymphatic vessel | 4 studies | 21% ± 4% | |
smooth muscle cell | 4 studies | 18% ± 1% | |
hepatocyte | 3 studies | 35% ± 23% | |
macrophage | 3 studies | 20% ± 3% | |
pericyte | 3 studies | 22% ± 6% | |
type II pneumocyte | 3 studies | 19% ± 4% | |
lymphocyte | 3 studies | 23% ± 5% | |
goblet cell | 3 studies | 28% ± 14% | |
transit amplifying cell | 3 studies | 28% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
stomach | 100% | 1139.45 | 359 / 359 | 100% | 5.03 | 286 / 286 |
prostate | 100% | 1536.11 | 245 / 245 | 100% | 4.77 | 501 / 502 |
esophagus | 100% | 912.30 | 1439 / 1445 | 100% | 5.37 | 183 / 183 |
bladder | 100% | 996.86 | 21 / 21 | 99% | 4.80 | 501 / 504 |
thymus | 100% | 1694.74 | 653 / 653 | 99% | 6.16 | 601 / 605 |
lung | 99% | 1120.14 | 575 / 578 | 100% | 4.14 | 1152 / 1155 |
intestine | 100% | 1119.32 | 965 / 966 | 99% | 4.84 | 523 / 527 |
breast | 100% | 1891.58 | 459 / 459 | 99% | 4.07 | 1106 / 1118 |
pancreas | 100% | 880.01 | 327 / 328 | 99% | 4.50 | 176 / 178 |
uterus | 100% | 1452.64 | 170 / 170 | 98% | 3.77 | 452 / 459 |
ovary | 100% | 1304.94 | 180 / 180 | 98% | 3.32 | 422 / 430 |
adrenal gland | 100% | 1212.99 | 258 / 258 | 98% | 3.03 | 225 / 230 |
kidney | 99% | 889.10 | 88 / 89 | 99% | 4.52 | 888 / 901 |
skin | 100% | 1595.01 | 1809 / 1809 | 96% | 3.48 | 452 / 472 |
brain | 94% | 593.70 | 2473 / 2642 | 100% | 4.46 | 703 / 705 |
liver | 100% | 825.76 | 225 / 226 | 93% | 2.83 | 378 / 406 |
adipose | 100% | 1445.84 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 1310.61 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 3.20 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.95 | 1 / 1 |
blood vessel | 100% | 1070.10 | 1329 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 3.65 | 27 / 29 |
heart | 90% | 433.99 | 772 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 84% | 3.02 | 67 / 80 |
muscle | 83% | 347.09 | 669 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 54% | 417.11 | 500 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016254 | Biological process | preassembly of GPI anchor in ER membrane |
GO_0006506 | Biological process | GPI anchor biosynthetic process |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0000225 | Molecular function | N-acetylglucosaminylphosphatidylinositol deacetylase activity |
Gene name | PIGL |
Protein name | N-acetylglucosaminylphosphatidylinositol deacetylase (EC 3.5.1.89) Phosphatidylinositol glycan anchor biosynthesis class L N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase (EC 3.5.1.89) (Phosphatidylinositol-glycan biosynthesis class L protein) (PIG-L) |
Synonyms | |
Description | FUNCTION: Catalyzes the second step of glycosylphosphatidylinositol (GPI) biosynthesis, which is the de-N-acetylation of N-acetylglucosaminyl-phosphatidylinositol. . |
Accessions | J3QQI7 ENST00000585034.5 ENST00000395844.8 ENST00000584797.5 ENST00000581006.5 ENST00000463810.2 Q9Y2B2 ENST00000596678.2 A0A096LPK2 ENST00000470116.2 B4DJK6 M0QYT4 J3QLG8 A8MTV0 ENST00000225609.10 [Q9Y2B2-1] J3KSD1 |