Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 18 studies | 28% ± 13% | |
fibroblast | 17 studies | 28% ± 12% | |
smooth muscle cell | 15 studies | 32% ± 12% | |
pericyte | 12 studies | 33% ± 14% | |
endothelial cell of lymphatic vessel | 11 studies | 33% ± 17% | |
type I pneumocyte | 8 studies | 45% ± 13% | |
adipocyte | 8 studies | 43% ± 17% | |
cardiac muscle cell | 5 studies | 41% ± 17% | |
mesothelial cell | 4 studies | 28% ± 9% | |
hepatocyte | 4 studies | 60% ± 23% | |
lymphocyte | 3 studies | 22% ± 6% | |
muscle cell | 3 studies | 38% ± 23% | |
connective tissue cell | 3 studies | 36% ± 20% | |
epithelial cell | 3 studies | 31% ± 11% | |
adventitial cell | 3 studies | 28% ± 10% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 33% ± 11% | |
kidney loop of Henle epithelial cell | 3 studies | 29% ± 11% | |
renal principal cell | 3 studies | 26% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 4986.81 | 89 / 89 | 98% | 25.83 | 886 / 901 |
prostate | 99% | 4557.24 | 242 / 245 | 87% | 10.25 | 435 / 502 |
breast | 99% | 5114.51 | 456 / 459 | 85% | 10.34 | 949 / 1118 |
uterus | 99% | 5355.66 | 169 / 170 | 83% | 16.26 | 381 / 459 |
lung | 100% | 5881.64 | 576 / 578 | 82% | 15.99 | 945 / 1155 |
liver | 100% | 2976.49 | 225 / 226 | 81% | 7.38 | 329 / 406 |
thymus | 98% | 2430.86 | 637 / 653 | 76% | 7.16 | 462 / 605 |
bladder | 100% | 9586.29 | 21 / 21 | 72% | 9.81 | 363 / 504 |
esophagus | 89% | 5130.36 | 1293 / 1445 | 81% | 23.70 | 149 / 183 |
pancreas | 68% | 1096.09 | 222 / 328 | 91% | 9.89 | 162 / 178 |
stomach | 97% | 4000.55 | 347 / 359 | 51% | 5.37 | 146 / 286 |
skin | 97% | 3709.95 | 1762 / 1809 | 40% | 4.63 | 190 / 472 |
intestine | 89% | 7208.25 | 861 / 966 | 38% | 3.04 | 200 / 527 |
ovary | 87% | 1955.23 | 157 / 180 | 29% | 1.93 | 126 / 430 |
adrenal gland | 74% | 1653.12 | 190 / 258 | 30% | 1.98 | 68 / 230 |
adipose | 100% | 8022.21 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 9198.45 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 3071.02 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.20 | 1 / 1 |
heart | 95% | 4345.57 | 821 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 80% | 10.65 | 36 / 45 |
muscle | 29% | 516.52 | 235 / 803 | 0% | 0 | 0 / 0 |
brain | 4% | 59.98 | 95 / 2642 | 12% | 0.72 | 84 / 705 |
eye | 0% | 0 | 0 / 0 | 10% | 0.61 | 8 / 80 |
peripheral blood | 0% | 2.62 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030010 | Biological process | establishment of cell polarity |
GO_1903690 | Biological process | negative regulation of wound healing, spreading of epidermal cells |
GO_0045184 | Biological process | establishment of protein localization |
GO_0051895 | Biological process | negative regulation of focal adhesion assembly |
GO_0010470 | Biological process | regulation of gastrulation |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_1904261 | Biological process | positive regulation of basement membrane assembly involved in embryonic body morphogenesis |
GO_0070507 | Biological process | regulation of microtubule cytoskeleton organization |
GO_0010717 | Biological process | regulation of epithelial to mesenchymal transition |
GO_0016477 | Biological process | cell migration |
GO_0051497 | Biological process | negative regulation of stress fiber assembly |
GO_0005886 | Cellular component | plasma membrane |
GO_0045180 | Cellular component | basal cortex |
GO_0031252 | Cellular component | cell leading edge |
GO_0005925 | Cellular component | focal adhesion |
GO_0045111 | Cellular component | intermediate filament cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_0045296 | Molecular function | cadherin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | PHLDB2 |
Protein name | Pleckstrin homology like domain family B member 2 PHLDB2 protein Pleckstrin homology-like domain family B member 2 (Protein LL5-beta) Pleckstrin homology like domain family B member 2 (Pleckstrin homology-like domain, family B, member 2, isoform CRA_b) |
Synonyms | LL5B hCG_2036872 |
Description | FUNCTION: Seems to be involved in the assembly of the postsynaptic apparatus. May play a role in acetyl-choline receptor (AChR) aggregation in the postsynaptic membrane (By similarity). . |
Accessions | ENST00000481953.5 [Q86SQ0-2] ENST00000498699.5 Q8IXY4 ENST00000431670.7 [Q86SQ0-1] ENST00000478922.1 E9PGF6 Q86SQ0 ENST00000412622.5 [Q86SQ0-2] ENST00000393923.7 [Q86SQ0-3] ENST00000477695.5 G5E9V3 E9PDY7 ENST00000495180.1 E9PFQ4 A0A1W2PRJ2 ENST00000393925.7 [Q86SQ0-1] ENST00000640905.1 Q8NEI7 A0A1W2PQ63 A0A1W2PRT1 ENST00000478733.6 ENST00000638331.1 |