Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 9 studies | 23% ± 5% | |
B cell | 6 studies | 18% ± 1% | |
fibroblast | 6 studies | 21% ± 4% | |
epithelial cell | 6 studies | 30% ± 13% | |
natural killer cell | 5 studies | 20% ± 2% | |
neuron | 5 studies | 24% ± 7% | |
glutamatergic neuron | 5 studies | 36% ± 18% | |
amacrine cell | 4 studies | 28% ± 9% | |
retinal bipolar neuron | 4 studies | 26% ± 8% | |
retinal rod cell | 4 studies | 19% ± 1% | |
pericyte | 4 studies | 19% ± 4% | |
GABAergic neuron | 4 studies | 33% ± 15% | |
oligodendrocyte | 4 studies | 29% ± 8% | |
T cell | 3 studies | 16% ± 0% | |
leukocyte | 3 studies | 19% ± 3% | |
naive B cell | 3 studies | 17% ± 2% | |
naive thymus-derived CD4-positive, alpha-beta T cell | 3 studies | 20% ± 3% | |
effector memory CD8-positive, alpha-beta T cell | 3 studies | 21% ± 3% | |
mature NK T cell | 3 studies | 18% ± 2% | |
retinal ganglion cell | 3 studies | 27% ± 10% | |
connective tissue cell | 3 studies | 21% ± 4% | |
myofibroblast cell | 3 studies | 20% ± 5% | |
retinal cone cell | 3 studies | 26% ± 4% | |
gamma-delta T cell | 3 studies | 25% ± 10% | |
intestinal crypt stem cell | 3 studies | 18% ± 2% | |
basal cell | 3 studies | 21% ± 4% | |
transit amplifying cell | 3 studies | 21% ± 6% | |
interneuron | 3 studies | 38% ± 28% | |
plasmacytoid dendritic cell | 3 studies | 19% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 1610.64 | 459 / 459 | 100% | 26.16 | 1118 / 1118 |
esophagus | 100% | 2027.81 | 1445 / 1445 | 100% | 22.78 | 183 / 183 |
ovary | 100% | 2037.73 | 180 / 180 | 100% | 24.51 | 430 / 430 |
stomach | 100% | 1195.47 | 359 / 359 | 100% | 20.94 | 286 / 286 |
skin | 100% | 1511.82 | 1808 / 1809 | 100% | 33.26 | 472 / 472 |
brain | 100% | 1366.38 | 2640 / 2642 | 100% | 30.87 | 705 / 705 |
thymus | 100% | 1777.04 | 653 / 653 | 100% | 30.76 | 604 / 605 |
lung | 100% | 1374.81 | 577 / 578 | 100% | 23.47 | 1155 / 1155 |
intestine | 100% | 1769.37 | 966 / 966 | 100% | 22.24 | 526 / 527 |
bladder | 100% | 1943.57 | 21 / 21 | 100% | 25.02 | 503 / 504 |
prostate | 100% | 1817.19 | 245 / 245 | 100% | 21.77 | 501 / 502 |
uterus | 100% | 2260.28 | 170 / 170 | 100% | 28.95 | 458 / 459 |
kidney | 100% | 1203.71 | 89 / 89 | 99% | 18.15 | 895 / 901 |
adrenal gland | 100% | 1521.59 | 258 / 258 | 99% | 20.25 | 228 / 230 |
liver | 100% | 856.30 | 226 / 226 | 99% | 12.27 | 401 / 406 |
pancreas | 99% | 747.98 | 326 / 328 | 99% | 19.47 | 176 / 178 |
adipose | 100% | 1548.63 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1651.37 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 24.55 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 28.00 | 29 / 29 |
spleen | 100% | 1576.86 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 23.76 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.77 | 1 / 1 |
muscle | 100% | 818.09 | 799 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 915.96 | 854 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 74% | 904.13 | 691 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006915 | Biological process | apoptotic process |
GO_0051384 | Biological process | response to glucocorticoid |
GO_0008380 | Biological process | RNA splicing |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005689 | Cellular component | U12-type spliceosomal complex |
Gene name | PDCD7 |
Protein name | PDCD7 protein Programmed cell death 7, isoform CRA_a (U11/U12 snRNP 59K) Programmed cell death 7 Programmed cell death protein 7 (ES18) (hES18) |
Synonyms | hCG_23672 |
Description | FUNCTION: Promotes apoptosis when overexpressed. . |
Accessions | Q569I4 ENST00000560313.2 ENST00000204549.9 H3BT73 A3KMF9 Q6IEG3 Q8N8D1 |