PAX9 | OmnibusX

Name	Number of supported studies	Average coverage
basal cell	5 studies	27% ± 15%	Explore
squamous epithelial cell	3 studies	43% ± 23%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of PAX9 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	98%	695.27	240 / 245	89%	6.58	446 / 502
esophagus	96%	4891.87	1388 / 1445	84%	23.89	154 / 183
thymus	94%	148.58	611 / 653	55%	19.10	330 / 605
bladder	95%	110.81	20 / 21	44%	3.19	223 / 504
lung	55%	107.61	317 / 578	71%	11.32	817 / 1155
breast	53%	66.36	243 / 459	70%	5.81	784 / 1118
uterus	49%	87.92	84 / 170	67%	9.85	307 / 459
tonsil	0%	0	0 / 0	96%	36.51	43 / 45
skin	70%	155.33	1270 / 1809	15%	0.82	69 / 472
intestine	48%	70.35	460 / 966	30%	1.94	159 / 527
stomach	42%	50.00	152 / 359	21%	0.85	60 / 286
blood vessel	63%	156.05	839 / 1335	0%	0	0 / 0
pancreas	8%	6.10	26 / 328	20%	0.97	35 / 178
ovary	11%	5.53	19 / 180	11%	0.76	49 / 430
lymph node	0%	0	0 / 0	17%	1.32	5 / 29
adipose	13%	11.11	151 / 1204	0%	0	0 / 0
kidney	6%	3.07	5 / 89	2%	0.43	14 / 901
spleen	7%	3.97	16 / 241	0%	0	0 / 0
peripheral blood	5%	7.85	51 / 929	0%	0	0 / 0
brain	4%	2.03	93 / 2642	2%	0.08	11 / 705
adrenal gland	1%	1.11	3 / 258	3%	0.21	7 / 230
muscle	2%	2.54	15 / 803	0%	0	0 / 0
heart	1%	0.62	11 / 861	0%	0	0 / 0
liver	0%	0.46	1 / 226	1%	0.03	3 / 406
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0042481	Biological process	regulation of odontogenesis
GO_0048856	Biological process	anatomical structure development
GO_0007492	Biological process	endoderm development
GO_0042476	Biological process	odontogenesis
GO_0071363	Biological process	cellular response to growth factor stimulus
GO_0060325	Biological process	face morphogenesis
GO_0045892	Biological process	negative regulation of DNA-templated transcription
GO_0045944	Biological process	positive regulation of transcription by RNA polymerase II
GO_0006357	Biological process	regulation of transcription by RNA polymerase II
GO_0005730	Cellular component	nucleolus
GO_0005654	Cellular component	nucleoplasm
GO_0000785	Cellular component	chromatin
GO_1990837	Molecular function	sequence-specific double-stranded DNA binding
GO_0000978	Molecular function	RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO_0000981	Molecular function	DNA-binding transcription factor activity, RNA polymerase II-specific
GO_0001228	Molecular function	DNA-binding transcription activator activity, RNA polymerase II-specific
GO_0005515	Molecular function	protein binding

Gene name	PAX9
Protein name	Paired box protein Pax-9 Paired box 9
Synonyms	hCG_20991 Pax9
Description	FUNCTION: Transcription factor required for normal development of thymus, parathyroid glands, ultimobranchial bodies, teeth, skeletal elements of skull and larynx as well as distal limbs. . FUNCTION: Transcription factor required for normal development of thymus, parathyroid glands, ultimobranchial bodies, teeth, skeletal elements of skull and larynx as well as distal limbs. . FUNCTION: Transcription factor required for normal development of thymus, parathyroid glands, ultimobranchial bodies, teeth, skeletal elements of skull and larynx as well as distal limbs. . FUNCTION: Transcription factor required for normal development of thymus, parathyroid glands, ultimobranchial bodies, teeth, skeletal elements of skull and larynx as well as distal limbs. .
Accessions	P55771 E9KY20 A0A669KBA7 Q2L4T1 ENST00000361487.7 ENST00000555639.2 E9KY68 ENST00000402703.6 E9KY40 Q7Z4A7

PAX9 report