PAX3 | OmnibusX

Name	Number of supported studies	Average coverage
astrocyte	4 studies	38% ± 19%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of PAX3 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
skin	96%	215.04	1739 / 1809	99%	38.34	465 / 472
eye	0%	0	0 / 0	100%	86.23	80 / 80
muscle	99%	170.13	796 / 803	0%	0	0 / 0
breast	87%	160.48	400 / 459	3%	0.09	34 / 1118
blood vessel	54%	97.18	720 / 1335	0%	0	0 / 0
brain	29%	76.51	774 / 2642	13%	0.66	93 / 705
adipose	32%	44.59	380 / 1204	0%	0	0 / 0
prostate	29%	20.51	70 / 245	0%	0	0 / 502
uterus	7%	3.55	12 / 170	7%	0.32	32 / 459
esophagus	0%	0.08	2 / 1445	11%	0.26	21 / 183
tonsil	0%	0	0 / 0	9%	0.21	4 / 45
bladder	0%	0	0 / 21	6%	0.17	32 / 504
lung	1%	0.24	3 / 578	5%	0.19	60 / 1155
heart	3%	1.28	24 / 861	0%	0	0 / 0
peripheral blood	3%	3.31	25 / 929	0%	0	0 / 0
pancreas	0%	0	0 / 328	2%	0.05	4 / 178
adrenal gland	1%	0.63	2 / 258	1%	0.04	3 / 230
stomach	0%	0	0 / 359	1%	0.03	4 / 286
ovary	0%	0	0 / 180	1%	0.13	6 / 430
intestine	0%	0	0 / 966	1%	0.06	7 / 527
thymus	0%	0.14	2 / 653	1%	0.01	4 / 605
kidney	0%	0	0 / 89	1%	0.02	8 / 901
liver	0%	0	0 / 226	1%	0.03	3 / 406
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006915	Biological process	apoptotic process
GO_0007605	Biological process	sensory perception of sound
GO_0048856	Biological process	anatomical structure development
GO_0007399	Biological process	nervous system development
GO_0045893	Biological process	positive regulation of DNA-templated transcription
GO_0007517	Biological process	muscle organ development
GO_0045944	Biological process	positive regulation of transcription by RNA polymerase II
GO_0006357	Biological process	regulation of transcription by RNA polymerase II
GO_0009887	Biological process	animal organ morphogenesis
GO_0005654	Cellular component	nucleoplasm
GO_0000785	Cellular component	chromatin
GO_1990837	Molecular function	sequence-specific double-stranded DNA binding
GO_0000978	Molecular function	RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO_0003700	Molecular function	DNA-binding transcription factor activity
GO_0005515	Molecular function	protein binding
GO_0000981	Molecular function	DNA-binding transcription factor activity, RNA polymerase II-specific
GO_0043565	Molecular function	sequence-specific DNA binding
GO_0071837	Molecular function	HMG box domain binding

Gene name	PAX3
Protein name	Transcriptional factor PAX3 Paired box protein Pax-3 (HuP2)
Synonyms	HUP2
Description	FUNCTION: Transcription factor that may regulate cell proliferation, migration and apoptosis. Involved in neural development and myogenesis. Transcriptional activator of MITF, acting synergistically with SOX10 . .
Accessions	ENST00000258387.6 [P23760-3] P23760 ENST00000336840.11 [P23760-5] A0A1L4AAQ7 ENST00000350526.9 [P23760-1] ENST00000344493.9 [P23760-4] ENST00000409828.7 [P23760-2] ENST00000409551.7 [P23760-6] ENST00000392070.7 [P23760-7] A0A1L4AAP0 A0A1L4AAN6 A0A1L4AAN8 ENST00000392069.6 [P23760-8]

PAX3 report