Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 17 studies | 36% ± 18% | |
astrocyte | 16 studies | 62% ± 19% | |
macrophage | 12 studies | 33% ± 11% | |
microglial cell | 11 studies | 36% ± 12% | |
oligodendrocyte precursor cell | 10 studies | 26% ± 9% | |
type I pneumocyte | 9 studies | 41% ± 16% | |
epithelial cell | 9 studies | 36% ± 17% | |
ciliated cell | 9 studies | 27% ± 10% | |
endothelial cell of lymphatic vessel | 9 studies | 49% ± 18% | |
pericyte | 8 studies | 32% ± 16% | |
type II pneumocyte | 8 studies | 43% ± 16% | |
fibroblast | 6 studies | 32% ± 8% | |
cardiac muscle cell | 5 studies | 37% ± 7% | |
myeloid cell | 5 studies | 33% ± 15% | |
monocyte | 5 studies | 25% ± 8% | |
basal cell | 5 studies | 34% ± 23% | |
GABAergic neuron | 4 studies | 29% ± 10% | |
interneuron | 4 studies | 28% ± 6% | |
retinal cone cell | 4 studies | 21% ± 4% | |
dendritic cell | 4 studies | 25% ± 2% | |
mesothelial cell | 4 studies | 35% ± 10% | |
Mueller cell | 4 studies | 36% ± 18% | |
club cell | 4 studies | 20% ± 3% | |
endothelial cell of sinusoid | 3 studies | 31% ± 17% | |
neuron | 3 studies | 25% ± 11% | |
progenitor cell | 3 studies | 37% ± 4% | |
retina horizontal cell | 3 studies | 43% ± 26% | |
mast cell | 3 studies | 26% ± 11% | |
hepatocyte | 3 studies | 72% ± 25% | |
abnormal cell | 3 studies | 30% ± 17% | |
ependymal cell | 3 studies | 35% ± 10% | |
enterocyte | 3 studies | 20% ± 4% | |
enteroendocrine cell | 3 studies | 18% ± 3% | |
goblet cell | 3 studies | 28% ± 11% | |
alveolar macrophage | 3 studies | 37% ± 8% | |
glutamatergic neuron | 3 studies | 26% ± 3% | |
mucus secreting cell | 3 studies | 24% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 2809.61 | 1805 / 1809 | 98% | 17.28 | 464 / 472 |
brain | 98% | 1142.61 | 2597 / 2642 | 99% | 20.43 | 700 / 705 |
intestine | 96% | 1951.63 | 932 / 966 | 98% | 18.68 | 518 / 527 |
stomach | 96% | 786.11 | 344 / 359 | 98% | 20.05 | 281 / 286 |
lung | 100% | 1742.97 | 576 / 578 | 94% | 14.21 | 1088 / 1155 |
esophagus | 94% | 1371.79 | 1363 / 1445 | 99% | 27.79 | 182 / 183 |
liver | 100% | 2599.44 | 226 / 226 | 91% | 11.60 | 368 / 406 |
pancreas | 95% | 601.77 | 311 / 328 | 89% | 6.94 | 159 / 178 |
bladder | 90% | 442.05 | 19 / 21 | 92% | 10.98 | 465 / 504 |
kidney | 100% | 1044.93 | 89 / 89 | 82% | 7.02 | 743 / 901 |
breast | 99% | 853.26 | 453 / 459 | 83% | 7.04 | 932 / 1118 |
uterus | 39% | 186.01 | 66 / 170 | 90% | 9.90 | 413 / 459 |
thymus | 86% | 398.02 | 560 / 653 | 20% | 0.86 | 122 / 605 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.81 | 1 / 1 |
adipose | 100% | 1292.54 | 1200 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 12.35 | 44 / 45 |
heart | 97% | 1764.49 | 837 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 14.62 | 77 / 80 |
spleen | 85% | 509.78 | 206 / 241 | 0% | 0 | 0 / 0 |
ovary | 22% | 93.10 | 39 / 180 | 60% | 4.72 | 257 / 430 |
adrenal gland | 74% | 333.50 | 190 / 258 | 7% | 0.40 | 17 / 230 |
prostate | 43% | 173.20 | 106 / 245 | 33% | 2.19 | 166 / 502 |
blood vessel | 48% | 266.86 | 645 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.18 | 1 / 29 |
muscle | 3% | 12.25 | 26 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 4.29 | 9 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030154 | Biological process | cell differentiation |
Gene name | NHSL1 |
Protein name | NHS like 1 NHS-like protein 1 |
Synonyms | KIAA1357 C6orf63 |
Description | |
Accessions | ENST00000533765.1 ENST00000342260.9 E9PAK2 ENST00000343505.10 [Q5SYE7-2] ENST00000491526.6 E9PMJ0 ENST00000427025.6 [Q5SYE7-1] H0YDF6 Q5SYE7 |