Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 4 studies | 52% ± 20% | |
Schwann cell | 3 studies | 45% ± 21% | |
glial cell | 3 studies | 30% ± 19% | |
neuron | 3 studies | 28% ± 9% |
Insufficient scRNA-seq data for expression of NGFR at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 98% | 3124.22 | 239 / 245 | 81% | 14.12 | 408 / 502 |
thymus | 99% | 4827.88 | 648 / 653 | 75% | 33.00 | 454 / 605 |
adrenal gland | 99% | 3083.19 | 256 / 258 | 69% | 13.75 | 158 / 230 |
breast | 98% | 3351.45 | 448 / 459 | 53% | 11.89 | 595 / 1118 |
skin | 69% | 1616.14 | 1253 / 1809 | 77% | 115.63 | 362 / 472 |
pancreas | 69% | 871.65 | 225 / 328 | 72% | 22.80 | 128 / 178 |
kidney | 73% | 1069.71 | 65 / 89 | 62% | 18.38 | 559 / 901 |
uterus | 82% | 1563.38 | 140 / 170 | 53% | 25.01 | 241 / 459 |
esophagus | 86% | 1675.16 | 1241 / 1445 | 45% | 25.03 | 82 / 183 |
liver | 93% | 1808.30 | 210 / 226 | 36% | 8.35 | 147 / 406 |
bladder | 90% | 2343.24 | 19 / 21 | 25% | 6.13 | 124 / 504 |
brain | 33% | 581.92 | 880 / 2642 | 74% | 24.98 | 523 / 705 |
spleen | 100% | 3579.03 | 240 / 241 | 0% | 0 | 0 / 0 |
intestine | 86% | 1883.63 | 828 / 966 | 13% | 2.66 | 67 / 527 |
adipose | 96% | 4153.40 | 1157 / 1204 | 0% | 0 | 0 / 0 |
heart | 92% | 3050.81 | 788 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 91% | 2479.60 | 1211 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 82% | 51.05 | 37 / 45 |
stomach | 44% | 932.31 | 159 / 359 | 20% | 5.82 | 57 / 286 |
lung | 26% | 272.97 | 149 / 578 | 35% | 12.71 | 404 / 1155 |
ovary | 23% | 446.80 | 42 / 180 | 20% | 5.29 | 85 / 430 |
lymph node | 0% | 0 | 0 / 0 | 28% | 3.94 | 8 / 29 |
muscle | 22% | 302.05 | 175 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 11% | 7.87 | 9 / 80 |
peripheral blood | 1% | 8.25 | 10 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0042475 | Biological process | odontogenesis of dentin-containing tooth |
GO_0006919 | Biological process | activation of cysteine-type endopeptidase activity involved in apoptotic process |
GO_1903588 | Biological process | negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis |
GO_0048146 | Biological process | positive regulation of fibroblast proliferation |
GO_0021675 | Biological process | nerve development |
GO_0031069 | Biological process | hair follicle morphogenesis |
GO_0006886 | Biological process | intracellular protein transport |
GO_0035907 | Biological process | dorsal aorta development |
GO_0001678 | Biological process | intracellular glucose homeostasis |
GO_0032922 | Biological process | circadian regulation of gene expression |
GO_0051799 | Biological process | negative regulation of hair follicle development |
GO_0042488 | Biological process | positive regulation of odontogenesis of dentin-containing tooth |
GO_0051402 | Biological process | neuron apoptotic process |
GO_0016048 | Biological process | detection of temperature stimulus |
GO_1902895 | Biological process | positive regulation of miRNA transcription |
GO_0048144 | Biological process | fibroblast proliferation |
GO_0099171 | Biological process | presynaptic modulation of chemical synaptic transmission |
GO_0007417 | Biological process | central nervous system development |
GO_0007266 | Biological process | Rho protein signal transduction |
GO_0030336 | Biological process | negative regulation of cell migration |
GO_2001235 | Biological process | positive regulation of apoptotic signaling pathway |
GO_0040037 | Biological process | negative regulation of fibroblast growth factor receptor signaling pathway |
GO_0042593 | Biological process | glucose homeostasis |
GO_0007411 | Biological process | axon guidance |
GO_1900182 | Biological process | positive regulation of protein localization to nucleus |
GO_0008543 | Biological process | fibroblast growth factor receptor signaling pathway |
GO_0098793 | Cellular component | presynapse |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0031594 | Cellular component | neuromuscular junction |
GO_0043197 | Cellular component | dendritic spine |
GO_0016020 | Cellular component | membrane |
GO_0043204 | Cellular component | perikaryon |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005911 | Cellular component | cell-cell junction |
GO_0009986 | Cellular component | cell surface |
GO_0005829 | Cellular component | cytosol |
GO_0014069 | Cellular component | postsynaptic density |
GO_0030426 | Cellular component | growth cone |
GO_0005768 | Cellular component | endosome |
GO_0015026 | Molecular function | coreceptor activity |
GO_0038023 | Molecular function | signaling receptor activity |
GO_0005035 | Molecular function | death receptor activity |
GO_0004888 | Molecular function | transmembrane signaling receptor activity |
GO_0001540 | Molecular function | amyloid-beta binding |
GO_0031625 | Molecular function | ubiquitin protein ligase binding |
GO_0031267 | Molecular function | small GTPase binding |
GO_0043121 | Molecular function | neurotrophin binding |
GO_0048406 | Molecular function | nerve growth factor binding |
GO_0005516 | Molecular function | calmodulin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | NGFR |
Protein name | Tumor necrosis factor receptor superfamily member 16 (Gp80-LNGFR) (Low affinity neurotrophin receptor p75NTR) (Low-affinity nerve growth factor receptor) (NGF receptor) (Low-affinity nerve growth factor receptor p75NGFR) (Low-affinity nerve growth factor receptor p75NGR) (p75 ICD) (CD antigen CD271) |
Synonyms | TNFRSF16 |
Description | FUNCTION: Low affinity receptor which can bind to NGF, BDNF, NTF3, and NTF4. Forms a heterodimeric receptor with SORCS2 that binds the precursor forms of NGF, BDNF and NTF3 with high affinity, and has much lower affinity for mature NGF and BDNF . Plays an important role in differentiation and survival of specific neuronal populations during development (By similarity). Can mediate cell survival as well as cell death of neural cells. Plays a role in the inactivation of RHOA . Plays a role in the regulation of the translocation of GLUT4 to the cell surface in adipocytes and skeletal muscle cells in response to insulin, probably by regulating RAB31 activity, and thereby contributes to the regulation of insulin-dependent glucose uptake (By similarity). Necessary for the circadian oscillation of the clock genes BMAL1, PER1, PER2 and NR1D1 in the suprachiasmatic nucleus (SCmgetaN) of the brain and in liver and of the genes involved in glucose and lipid metabolism in the liver . . |
Accessions | ENST00000504201.1 [P08138-2] P08138 ENST00000172229.8 [P08138-1] |