Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 10 studies | 24% ± 5% | |
oligodendrocyte | 8 studies | 32% ± 12% | |
B cell | 7 studies | 21% ± 6% | |
ciliated cell | 7 studies | 28% ± 12% | |
GABAergic neuron | 7 studies | 37% ± 18% | |
glutamatergic neuron | 6 studies | 42% ± 21% | |
astrocyte | 6 studies | 37% ± 14% | |
oligodendrocyte precursor cell | 6 studies | 31% ± 14% | |
microglial cell | 5 studies | 27% ± 7% | |
epithelial cell | 5 studies | 25% ± 6% | |
type I pneumocyte | 5 studies | 20% ± 4% | |
type II pneumocyte | 5 studies | 19% ± 3% | |
interneuron | 5 studies | 39% ± 24% | |
plasma cell | 4 studies | 45% ± 16% | |
retinal cone cell | 4 studies | 20% ± 2% | |
adipocyte | 4 studies | 22% ± 3% | |
club cell | 4 studies | 22% ± 7% | |
macrophage | 4 studies | 21% ± 5% | |
basal cell | 4 studies | 23% ± 10% | |
neuron | 4 studies | 40% ± 15% | |
cardiac muscle cell | 3 studies | 21% ± 2% | |
retinal rod cell | 3 studies | 18% ± 3% | |
hepatocyte | 3 studies | 45% ± 16% | |
fibroblast | 3 studies | 19% ± 3% | |
transit amplifying cell | 3 studies | 41% ± 20% | |
mast cell | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 698.18 | 459 / 459 | 100% | 18.29 | 1118 / 1118 |
esophagus | 100% | 599.02 | 1445 / 1445 | 100% | 6.21 | 183 / 183 |
ovary | 100% | 761.98 | 180 / 180 | 100% | 9.60 | 430 / 430 |
uterus | 100% | 718.26 | 170 / 170 | 100% | 8.49 | 458 / 459 |
liver | 100% | 799.77 | 226 / 226 | 100% | 8.86 | 405 / 406 |
thymus | 100% | 1089.51 | 653 / 653 | 100% | 10.62 | 603 / 605 |
prostate | 100% | 848.56 | 245 / 245 | 100% | 8.11 | 500 / 502 |
brain | 100% | 859.38 | 2642 / 2642 | 100% | 9.50 | 702 / 705 |
lung | 100% | 574.88 | 576 / 578 | 100% | 8.65 | 1153 / 1155 |
stomach | 100% | 561.22 | 359 / 359 | 99% | 7.35 | 284 / 286 |
bladder | 100% | 668.81 | 21 / 21 | 99% | 7.90 | 500 / 504 |
intestine | 100% | 767.06 | 966 / 966 | 99% | 7.00 | 522 / 527 |
pancreas | 100% | 531.23 | 327 / 328 | 98% | 5.05 | 175 / 178 |
kidney | 100% | 584.16 | 89 / 89 | 97% | 5.13 | 877 / 901 |
skin | 100% | 633.99 | 1807 / 1809 | 97% | 8.29 | 458 / 472 |
adrenal gland | 100% | 679.97 | 258 / 258 | 96% | 5.51 | 220 / 230 |
adipose | 100% | 542.61 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 8.63 | 29 / 29 |
muscle | 100% | 1082.06 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 898.37 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 7.24 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.35 | 1 / 1 |
blood vessel | 99% | 478.49 | 1327 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 687.56 | 847 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 7.28 | 71 / 80 |
peripheral blood | 59% | 278.81 | 545 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0009058 | Biological process | biosynthetic process |
GO_0032981 | Biological process | mitochondrial respiratory chain complex I assembly |
GO_0005634 | Cellular component | nucleus |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
Gene name | NDUFAF6 |
Protein name | NADH:ubiquinone oxidoreductase complex assembly factor 6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 (Putative phytoene synthase) |
Synonyms | C8orf38 |
Description | FUNCTION: Involved in the assembly of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I) at early stages. May play a role in the biogenesis of complex I subunit MT-ND1. . |
Accessions | ENST00000522683.5 ENST00000518608.5 Q330K2 A0A075B6P0 ENST00000520632.5 ENST00000520757.1 H0YB46 ENST00000396113.5 ENST00000517976.5 H0YBQ9 ENST00000697355.1 ENST00000523378.5 E5RFN5 ENST00000454358.6 ENST00000523337.5 [Q330K2-3] E5RHX9 ENST00000519136.5 ENST00000519804.2 ENST00000396124.9 [Q330K2-1] H0YB05 ENST00000518258.5 [Q330K2-3] E5RGD6 ENST00000396111.6 H0YBT9 H7C250 H0YC61 ENST00000697364.1 A0A8V8TLC1 |