Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 20 studies | 54% ± 19% | |
deuterosomal cell | 4 studies | 27% ± 3% | |
erythroblast | 3 studies | 21% ± 2% | |
glutamatergic neuron | 3 studies | 22% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 3 studies | 18% ± 0% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 256.44 | 2607 / 2642 | 99% | 9.36 | 695 / 705 |
ovary | 100% | 289.16 | 180 / 180 | 94% | 8.21 | 405 / 430 |
thymus | 100% | 175.31 | 650 / 653 | 87% | 4.88 | 526 / 605 |
kidney | 100% | 315.16 | 89 / 89 | 86% | 7.82 | 771 / 901 |
uterus | 99% | 206.45 | 169 / 170 | 85% | 9.23 | 391 / 459 |
pancreas | 89% | 77.27 | 293 / 328 | 94% | 6.65 | 167 / 178 |
breast | 97% | 153.47 | 443 / 459 | 84% | 5.66 | 937 / 1118 |
prostate | 98% | 150.89 | 240 / 245 | 75% | 2.85 | 375 / 502 |
esophagus | 89% | 103.41 | 1293 / 1445 | 78% | 5.59 | 143 / 183 |
bladder | 95% | 108.48 | 20 / 21 | 72% | 4.68 | 364 / 504 |
lung | 93% | 214.98 | 536 / 578 | 74% | 4.37 | 854 / 1155 |
skin | 86% | 154.85 | 1551 / 1809 | 78% | 5.69 | 370 / 472 |
intestine | 91% | 96.93 | 878 / 966 | 71% | 3.92 | 374 / 527 |
stomach | 79% | 77.25 | 284 / 359 | 73% | 4.33 | 210 / 286 |
adrenal gland | 89% | 67.26 | 229 / 258 | 39% | 1.35 | 90 / 230 |
blood vessel | 95% | 111.11 | 1265 / 1335 | 0% | 0 | 0 / 0 |
adipose | 94% | 122.98 | 1131 / 1204 | 0% | 0 | 0 / 0 |
spleen | 89% | 68.46 | 214 / 241 | 0% | 0 | 0 / 0 |
heart | 82% | 98.94 | 708 / 861 | 0% | 0 | 0 / 0 |
liver | 31% | 20.47 | 70 / 226 | 50% | 5.59 | 201 / 406 |
tonsil | 0% | 0 | 0 / 0 | 80% | 7.48 | 36 / 45 |
muscle | 55% | 33.83 | 441 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 48% | 1.90 | 14 / 29 |
eye | 0% | 0 | 0 / 0 | 29% | 1.05 | 23 / 80 |
peripheral blood | 19% | 32.17 | 179 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007288 | Biological process | sperm axoneme assembly |
GO_0051321 | Biological process | meiotic cell cycle |
GO_0070986 | Biological process | left/right axis specification |
GO_0045724 | Biological process | positive regulation of cilium assembly |
GO_0044782 | Biological process | cilium organization |
GO_0005930 | Cellular component | axoneme |
GO_0160111 | Cellular component | axonemal A tubule inner sheath |
GO_0005879 | Cellular component | axonemal microtubule |
GO_0031514 | Cellular component | motile cilium |
GO_0036126 | Cellular component | sperm flagellum |
GO_0005635 | Cellular component | nuclear envelope |
GO_0005882 | Cellular component | intermediate filament |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | MNS1 |
Protein name | Meiosis-specific nuclear structural protein 1 |
Synonyms | hCG_40113 |
Description | FUNCTION: Microtubule inner protein (MIP) part of the dynein-decorated doublet microtubules (DMTs) in cilia axoneme, which is required for motile cilia beating . May play a role in the control of meiotic division and germ cell differentiation through regulation of pairing and recombination during meiosis. Required for sperm flagella assembly (By similarity). May play a role in the assembly and function of the outer dynein arm-docking complex (ODA-DC). ODA-DC mediates outer dynein arms (ODA) binding onto the axonemal doublet microtubules . . |
Accessions | ENST00000260453.4 B3KQ70 Q8NEH6 |