Name | Number of supported studies | Average coverage | |
---|---|---|---|
mast cell | 20 studies | 33% ± 10% | |
type II pneumocyte | 11 studies | 54% ± 12% | |
ciliated cell | 9 studies | 27% ± 5% | |
goblet cell | 9 studies | 46% ± 24% | |
club cell | 7 studies | 28% ± 9% | |
respiratory goblet cell | 7 studies | 34% ± 14% | |
type I pneumocyte | 6 studies | 22% ± 6% | |
epithelial cell | 5 studies | 34% ± 12% | |
mucus secreting cell | 5 studies | 42% ± 6% | |
alveolar macrophage | 4 studies | 19% ± 3% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 45% ± 11% | |
ionocyte | 3 studies | 25% ± 7% | |
squamous epithelial cell | 3 studies | 43% ± 22% | |
abnormal cell | 3 studies | 34% ± 4% | |
melanocyte | 3 studies | 56% ± 21% | |
endothelial cell | 3 studies | 19% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 4 studies | 22% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 97% | 21181.33 | 238 / 245 | 100% | 184.64 | 501 / 502 |
skin | 94% | 2142.39 | 1708 / 1809 | 86% | 114.39 | 406 / 472 |
breast | 95% | 7880.24 | 438 / 459 | 83% | 172.07 | 932 / 1118 |
pancreas | 81% | 1195.11 | 266 / 328 | 84% | 82.09 | 150 / 178 |
lung | 99% | 9106.20 | 572 / 578 | 56% | 46.53 | 642 / 1155 |
thymus | 100% | 6432.28 | 653 / 653 | 49% | 20.30 | 298 / 605 |
stomach | 86% | 10567.92 | 310 / 359 | 52% | 24.90 | 148 / 286 |
bladder | 81% | 3040.86 | 17 / 21 | 44% | 20.56 | 221 / 504 |
liver | 100% | 2572.21 | 225 / 226 | 19% | 7.73 | 79 / 406 |
ovary | 82% | 1926.91 | 148 / 180 | 34% | 11.52 | 147 / 430 |
uterus | 83% | 2773.47 | 141 / 170 | 32% | 17.60 | 149 / 459 |
intestine | 55% | 1918.64 | 532 / 966 | 56% | 31.22 | 296 / 527 |
eye | 0% | 0 | 0 / 0 | 100% | 335.07 | 80 / 80 |
ureter | 0% | 0 | 0 / 0 | 100% | 39.99 | 1 / 1 |
heart | 91% | 3465.83 | 786 / 861 | 0% | 0 | 0 / 0 |
esophagus | 48% | 634.35 | 692 / 1445 | 38% | 24.41 | 69 / 183 |
adipose | 81% | 1518.02 | 976 / 1204 | 0% | 0 | 0 / 0 |
muscle | 24% | 251.31 | 194 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 18% | 220.33 | 246 / 1335 | 0% | 0 | 0 / 0 |
kidney | 12% | 109.74 | 11 / 89 | 3% | 1.41 | 29 / 901 |
adrenal gland | 0% | 12.78 | 1 / 258 | 13% | 5.90 | 31 / 230 |
tonsil | 0% | 0 | 0 / 0 | 4% | 1.02 | 2 / 45 |
brain | 0% | 4.26 | 12 / 2642 | 0% | 0.12 | 2 / 705 |
peripheral blood | 0% | 3.35 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
GO_0032402 | Biological process | melanosome transport |
GO_0006886 | Biological process | intracellular protein transport |
GO_0070062 | Cellular component | extracellular exosome |
GO_0030864 | Cellular component | cortical actin cytoskeleton |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0030425 | Cellular component | dendrite |
GO_0017022 | Molecular function | myosin binding |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
GO_0031267 | Molecular function | small GTPase binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | MLPH |
Protein name | Melanophilin (Exophilin-3) (Slp homolog lacking C2 domains a) (SlaC2-a) (Synaptotagmin-like protein 2a) Melanophilin Uncharacterized protein MLPH |
Synonyms | SLAC2A |
Description | FUNCTION: Rab effector protein involved in melanosome transport. Serves as link between melanosome-bound RAB27A and the motor protein MYO5A. . |
Accessions | ENST00000415753.5 H7C190 ENST00000429898.5 C9JKV5 ENST00000432475.5 Q53QF3 ENST00000410032.5 [Q9BV36-5] ENST00000409373.5 [Q9BV36-3] C9JI01 ENST00000422695.5 Q9BV36 ENST00000437893.5 ENST00000338530.8 [Q9BV36-2] ENST00000264605.8 [Q9BV36-1] ENST00000436965.5 ENST00000434770.1 H7C052 Q53QV8 H7C371 H7C3K9 H7C2D8 |