Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 14 studies | 59% ± 24% | |
pericyte | 13 studies | 59% ± 15% | |
connective tissue cell | 9 studies | 62% ± 22% | |
mesothelial cell | 8 studies | 65% ± 31% | |
myofibroblast cell | 7 studies | 44% ± 22% | |
epithelial cell | 7 studies | 43% ± 21% | |
adipocyte | 7 studies | 49% ± 16% | |
progenitor cell | 5 studies | 43% ± 16% | |
smooth muscle cell | 5 studies | 50% ± 11% | |
abnormal cell | 4 studies | 45% ± 22% | |
neuron | 4 studies | 37% ± 16% | |
Mueller cell | 4 studies | 23% ± 7% | |
hematopoietic stem cell | 4 studies | 25% ± 5% | |
intestinal crypt stem cell | 3 studies | 19% ± 2% | |
neural crest cell | 3 studies | 40% ± 27% | |
endothelial cell | 3 studies | 29% ± 8% | |
placental villous trophoblast | 3 studies | 60% ± 21% | |
chondrocyte | 3 studies | 56% ± 31% | |
GABAergic neuron | 3 studies | 40% ± 10% | |
glutamatergic neuron | 3 studies | 47% ± 16% | |
oligodendrocyte precursor cell | 3 studies | 19% ± 5% | |
interneuron | 3 studies | 31% ± 17% | |
erythroblast | 3 studies | 23% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 4001.04 | 576 / 578 | 97% | 48.86 | 1117 / 1155 |
pancreas | 100% | 1558.78 | 327 / 328 | 96% | 36.44 | 171 / 178 |
ovary | 97% | 1392.08 | 174 / 180 | 99% | 117.16 | 426 / 430 |
breast | 99% | 5968.95 | 456 / 459 | 86% | 30.16 | 964 / 1118 |
adrenal gland | 100% | 5042.62 | 258 / 258 | 78% | 29.37 | 180 / 230 |
thymus | 94% | 895.02 | 613 / 653 | 81% | 13.68 | 492 / 605 |
liver | 100% | 1319.87 | 225 / 226 | 71% | 21.01 | 288 / 406 |
intestine | 72% | 818.45 | 698 / 966 | 97% | 41.91 | 510 / 527 |
brain | 70% | 627.15 | 1841 / 2642 | 96% | 70.26 | 676 / 705 |
uterus | 66% | 812.19 | 113 / 170 | 89% | 90.14 | 410 / 459 |
prostate | 78% | 639.35 | 190 / 245 | 73% | 12.33 | 368 / 502 |
kidney | 93% | 1311.40 | 83 / 89 | 39% | 11.36 | 351 / 901 |
bladder | 33% | 367.71 | 7 / 21 | 83% | 42.21 | 420 / 504 |
esophagus | 26% | 169.63 | 375 / 1445 | 90% | 37.13 | 164 / 183 |
stomach | 19% | 127.66 | 69 / 359 | 93% | 38.40 | 267 / 286 |
spleen | 100% | 3941.15 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 88.69 | 1 / 1 |
adipose | 99% | 8956.83 | 1196 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 22.18 | 41 / 45 |
skin | 27% | 278.93 | 487 / 1809 | 25% | 18.93 | 120 / 472 |
blood vessel | 30% | 466.92 | 405 / 1335 | 0% | 0 | 0 / 0 |
heart | 26% | 225.76 | 228 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 14% | 1.97 | 4 / 29 |
eye | 0% | 0 | 0 / 0 | 8% | 1.02 | 6 / 80 |
muscle | 7% | 55.24 | 59 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 7% | 121.13 | 65 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007498 | Biological process | mesoderm development |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0016787 | Molecular function | hydrolase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | MEST |
Protein name | Mesoderm specific transcript homolog (Mouse) Mesoderm-specific transcript homolog protein (EC 3.-.-.-) (Paternally-expressed gene 1 protein) Mesoderm specific transcript |
Synonyms | hCG_18967 tcag7.331 PEG1 |
Description | |
Accessions | A4D1L9 ENST00000458161.2 ENST00000223215.10 [Q5EB52-1] ENST00000341441.9 [Q5EB52-2] ENST00000421001.5 ENST00000437637.6 ENST00000393187.5 [Q5EB52-2] Q5EB52 ENST00000399874.6 ENST00000378576.9 [Q5EB52-3] C9JG66 ENST00000463263.1 ENST00000433159.5 C9JCM6 ENST00000437945.6 ENST00000427521.6 [Q5EB52-3] ENST00000416162.7 [Q5EB52-3] C9JWU9 C9JRA9 R4GN52 C9JUD2 C9JW74 ENST00000462132.6 [Q5EB52-2] |