Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 20 studies | 43% ± 19% | |
oligodendrocyte precursor cell | 15 studies | 76% ± 16% | |
endothelial cell | 13 studies | 38% ± 21% | |
glutamatergic neuron | 12 studies | 86% ± 15% | |
pericyte | 12 studies | 31% ± 17% | |
GABAergic neuron | 11 studies | 83% ± 17% | |
type I pneumocyte | 10 studies | 41% ± 17% | |
retinal cone cell | 9 studies | 88% ± 11% | |
retinal rod cell | 9 studies | 67% ± 21% | |
microglial cell | 9 studies | 37% ± 18% | |
neuron | 8 studies | 55% ± 24% | |
amacrine cell | 8 studies | 55% ± 22% | |
retinal ganglion cell | 7 studies | 65% ± 22% | |
interneuron | 6 studies | 88% ± 11% | |
Mueller cell | 6 studies | 59% ± 19% | |
smooth muscle cell | 6 studies | 36% ± 11% | |
oligodendrocyte | 6 studies | 36% ± 18% | |
retinal bipolar neuron | 5 studies | 53% ± 22% | |
granule cell | 4 studies | 71% ± 15% | |
OFF-bipolar cell | 4 studies | 61% ± 20% | |
ON-bipolar cell | 4 studies | 52% ± 20% | |
pancreatic A cell | 3 studies | 33% ± 13% | |
type B pancreatic cell | 3 studies | 48% ± 27% | |
hepatic stellate cell | 3 studies | 30% ± 7% | |
macrophage | 3 studies | 29% ± 13% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 70% ± 4% | |
GABAergic interneuron | 3 studies | 88% ± 5% | |
epithelial cell | 3 studies | 25% ± 10% | |
retina horizontal cell | 3 studies | 51% ± 15% | |
GABAergic amacrine cell | 3 studies | 74% ± 13% | |
glycinergic amacrine cell | 3 studies | 53% ± 19% | |
rod bipolar cell | 3 studies | 57% ± 16% | |
ependymal cell | 3 studies | 60% ± 16% | |
fibroblast | 3 studies | 33% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 36808.28 | 2607 / 2642 | 99% | 212.30 | 700 / 705 |
thymus | 82% | 3668.89 | 536 / 653 | 87% | 25.46 | 525 / 605 |
lung | 80% | 3184.90 | 461 / 578 | 48% | 9.10 | 552 / 1155 |
skin | 72% | 2656.05 | 1308 / 1809 | 51% | 11.31 | 243 / 472 |
prostate | 14% | 394.27 | 35 / 245 | 78% | 13.88 | 393 / 502 |
adrenal gland | 8% | 290.97 | 20 / 258 | 73% | 51.06 | 169 / 230 |
blood vessel | 81% | 3516.68 | 1081 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 59% | 12.20 | 47 / 80 |
kidney | 1% | 40.31 | 1 / 89 | 57% | 8.21 | 511 / 901 |
esophagus | 23% | 981.02 | 327 / 1445 | 34% | 6.47 | 62 / 183 |
pancreas | 14% | 380.10 | 47 / 328 | 42% | 5.40 | 75 / 178 |
liver | 0% | 0 | 0 / 226 | 40% | 5.45 | 163 / 406 |
ovary | 9% | 234.89 | 17 / 180 | 26% | 2.92 | 110 / 430 |
breast | 7% | 181.48 | 33 / 459 | 23% | 3.83 | 262 / 1118 |
uterus | 1% | 19.50 | 1 / 170 | 25% | 4.03 | 113 / 459 |
tonsil | 0% | 0 | 0 / 0 | 18% | 2.22 | 8 / 45 |
bladder | 0% | 0 | 0 / 21 | 10% | 2.13 | 51 / 504 |
stomach | 3% | 87.99 | 12 / 359 | 6% | 0.62 | 18 / 286 |
adipose | 10% | 248.53 | 116 / 1204 | 0% | 0 | 0 / 0 |
intestine | 1% | 36.60 | 13 / 966 | 4% | 0.61 | 21 / 527 |
heart | 1% | 18.71 | 7 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1901953 | Biological process | positive regulation of anterograde dense core granule transport |
GO_0048813 | Biological process | dendrite morphogenesis |
GO_0031175 | Biological process | neuron projection development |
GO_0031115 | Biological process | negative regulation of microtubule polymerization |
GO_0032880 | Biological process | regulation of protein localization |
GO_1904527 | Biological process | negative regulation of microtubule binding |
GO_1903744 | Biological process | positive regulation of anterograde synaptic vesicle transport |
GO_0021954 | Biological process | central nervous system neuron development |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0030517 | Biological process | negative regulation of axon extension |
GO_0016358 | Biological process | dendrite development |
GO_0031113 | Biological process | regulation of microtubule polymerization |
GO_1902513 | Biological process | regulation of organelle transport along microtubule |
GO_0097441 | Cellular component | basal dendrite |
GO_0150001 | Cellular component | primary dendrite |
GO_0150014 | Cellular component | apical distal dendrite |
GO_1902737 | Cellular component | dendritic filopodium |
GO_0005874 | Cellular component | microtubule |
GO_0043198 | Cellular component | dendritic shaft |
GO_0043203 | Cellular component | axon hillock |
GO_1990769 | Cellular component | proximal neuron projection |
GO_0043194 | Cellular component | axon initial segment |
GO_0043025 | Cellular component | neuronal cell body |
GO_0044304 | Cellular component | main axon |
GO_0043005 | Cellular component | neuron projection |
GO_1990635 | Cellular component | proximal dendrite |
GO_0030425 | Cellular component | dendrite |
GO_0005829 | Cellular component | cytosol |
GO_0044294 | Cellular component | dendritic growth cone |
GO_0005737 | Cellular component | cytoplasm |
GO_0150002 | Cellular component | distal dendrite |
GO_0032839 | Cellular component | dendrite cytoplasm |
GO_0044307 | Cellular component | dendritic branch |
GO_0005875 | Cellular component | microtubule associated complex |
GO_0002162 | Molecular function | dystroglycan binding |
GO_0005198 | Molecular function | structural molecule activity |
GO_0008017 | Molecular function | microtubule binding |
GO_0048156 | Molecular function | tau protein binding |
GO_0005516 | Molecular function | calmodulin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | MAP2 |
Protein name | Microtubule associated protein 2 Microtubule-associated protein MAP2 protein Microtubule-associated protein 2 (MAP-2) |
Synonyms | hCG_1776452 |
Description | FUNCTION: The exact function of MAP2 is unknown but MAPs may stabilize the microtubules against depolymerization. They also seem to have a stiffening effect on microtubules. |
Accessions | E7EV03 A0A669KB77 A0A024R3Z1 H7BZB9 Q6NYC5 ENST00000392193.5 ENST00000452717.1 P11137 A8MZ31 ENST00000392194.5 [P11137-2] ENST00000447185.5 [P11137-3] ENST00000704357.1 ENST00000361559.8 [P11137-2] ENST00000682079.1 [P11137-1] ENST00000445941.5 ENST00000199940.10 [P11137-4] ENST00000360351.8 [P11137-1] ENST00000673860.1 |