LRRC23 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	19 studies	64% ± 18%	Explore
retinal rod cell	7 studies	24% ± 9%	Explore
epithelial cell	5 studies	22% ± 4%	Explore
retinal cone cell	5 studies	23% ± 3%	Explore
deuterosomal cell	4 studies	39% ± 8%	Explore
type II pneumocyte	4 studies	22% ± 2%	Explore
astrocyte	3 studies	20% ± 4%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	4 studies	21% ± 3%	Explore
eye	4 studies	21% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	1154.25	2642 / 2642	100%	28.96	705 / 705
thymus	100%	670.61	652 / 653	100%	15.93	605 / 605
prostate	100%	647.68	245 / 245	99%	10.59	499 / 502
ovary	100%	670.54	180 / 180	99%	15.49	427 / 430
adrenal gland	100%	488.29	257 / 258	100%	12.19	229 / 230
kidney	100%	634.81	89 / 89	99%	22.48	893 / 901
skin	100%	395.88	1804 / 1809	99%	13.12	469 / 472
breast	100%	430.07	459 / 459	98%	13.63	1095 / 1118
bladder	100%	540.48	21 / 21	97%	8.88	487 / 504
uterus	100%	743.53	170 / 170	94%	12.19	432 / 459
lung	100%	1031.93	576 / 578	94%	13.20	1091 / 1155
intestine	98%	476.67	946 / 966	89%	6.22	468 / 527
stomach	97%	360.18	350 / 359	81%	4.90	231 / 286
esophagus	98%	436.57	1418 / 1445	78%	5.28	142 / 183
pancreas	74%	151.15	242 / 328	98%	12.98	174 / 178
eye	0%	0	0 / 0	100%	10.54	80 / 80
ureter	0%	0	0 / 0	100%	5.23	1 / 1
adipose	99%	378.34	1196 / 1204	0%	0	0 / 0
muscle	99%	519.26	796 / 803	0%	0	0 / 0
blood vessel	99%	467.84	1323 / 1335	0%	0	0 / 0
spleen	99%	283.89	238 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	98%	7.67	44 / 45
lymph node	0%	0	0 / 0	97%	9.92	28 / 29
heart	96%	524.34	829 / 861	0%	0	0 / 0
liver	42%	78.19	96 / 226	44%	2.75	179 / 406
peripheral blood	50%	164.59	467 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0