LHX4 | OmnibusX

Name	Number of supported studies	Average coverage
retinal bipolar neuron	4 studies	21% ± 2%	Explore
OFF-bipolar cell	3 studies	28% ± 4%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of LHX4 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	97%	134.20	1405 / 1445	48%	0.84	87 / 183
breast	98%	164.78	450 / 459	46%	0.94	510 / 1118
ovary	100%	252.71	180 / 180	27%	0.50	114 / 430
bladder	100%	164.81	21 / 21	21%	0.50	107 / 504
stomach	98%	131.07	351 / 359	23%	0.41	67 / 286
lung	93%	154.28	536 / 578	28%	0.51	320 / 1155
kidney	100%	185.83	89 / 89	19%	0.34	169 / 901
intestine	99%	199.71	958 / 966	19%	0.29	99 / 527
uterus	99%	236.25	169 / 170	17%	0.31	76 / 459
pancreas	99%	185.27	326 / 328	13%	0.28	23 / 178
skin	99%	181.16	1784 / 1809	13%	0.20	60 / 472
prostate	100%	192.85	244 / 245	10%	0.16	51 / 502
thymus	100%	280.21	651 / 653	9%	0.12	53 / 605
brain	82%	128.15	2159 / 2642	23%	0.46	161 / 705
spleen	100%	218.68	241 / 241	0%	0	0 / 0
adrenal gland	97%	150.19	250 / 258	3%	0.06	7 / 230
adipose	97%	118.81	1173 / 1204	0%	0	0 / 0
blood vessel	96%	107.34	1276 / 1335	0%	0	0 / 0
liver	84%	65.94	189 / 226	9%	0.15	37 / 406
heart	82%	65.46	703 / 861	0%	0	0 / 0
peripheral blood	73%	202.33	676 / 929	0%	0	0 / 0
muscle	67%	41.40	534 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	14%	0.21	4 / 29
tonsil	0%	0	0 / 0	9%	0.10	4 / 45
eye	0%	0	0 / 0	4%	0.17	3 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006357	Biological process	regulation of transcription by RNA polymerase II
GO_0009887	Biological process	animal organ morphogenesis
GO_0001890	Biological process	placenta development
GO_0030182	Biological process	neuron differentiation
GO_0043066	Biological process	negative regulation of apoptotic process
GO_0021526	Biological process	medial motor column neuron differentiation
GO_0006915	Biological process	apoptotic process
GO_0008045	Biological process	motor neuron axon guidance
GO_0045944	Biological process	positive regulation of transcription by RNA polymerase II
GO_0000785	Cellular component	chromatin
GO_0005634	Cellular component	nucleus
GO_0001228	Molecular function	DNA-binding transcription activator activity, RNA polymerase II-specific
GO_0000977	Molecular function	RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO_0000981	Molecular function	DNA-binding transcription factor activity, RNA polymerase II-specific
GO_0043565	Molecular function	sequence-specific DNA binding
GO_1990837	Molecular function	sequence-specific double-stranded DNA binding
GO_0008327	Molecular function	methyl-CpG binding
GO_0008270	Molecular function	zinc ion binding
GO_0005515	Molecular function	protein binding

Gene name	LHX4
Protein name	LIM homeobox 4 isoform 2 LIM homeobox 4 LIM/homeobox protein Lhx4 (LIM homeobox protein 4) LIM homeobox protein 4 LIM homeobox 4 isoform 1
Synonyms
Description	FUNCTION: May play a critical role in the development of respiratory control mechanisms and in the normal growth and maturation of the lung. Binds preferentially to methylated DNA . .
Accessions	ENST00000561113.1 A0A0S2Z5S9 Q5RLJ1 H0YKF4 Q969G2 Q5RLJ3 Q5RLJ2 ENST00000263726.4 A0A0S2Z5S4

LHX4 report