Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 8 studies | 24% ± 9% | |
GABAergic neuron | 7 studies | 38% ± 19% | |
oligodendrocyte | 7 studies | 28% ± 9% | |
interneuron | 6 studies | 36% ± 22% | |
oligodendrocyte precursor cell | 6 studies | 28% ± 9% | |
astrocyte | 6 studies | 33% ± 13% | |
retinal cone cell | 5 studies | 25% ± 9% | |
glutamatergic neuron | 5 studies | 47% ± 23% | |
endothelial cell of lymphatic vessel | 4 studies | 19% ± 3% | |
fibroblast | 4 studies | 18% ± 4% | |
microglial cell | 3 studies | 20% ± 1% | |
neuron | 3 studies | 29% ± 11% | |
epithelial cell | 3 studies | 26% ± 1% | |
retinal rod cell | 3 studies | 25% ± 6% | |
transit amplifying cell | 3 studies | 31% ± 14% | |
adipocyte | 3 studies | 17% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 895.32 | 1445 / 1445 | 100% | 4.63 | 183 / 183 |
breast | 100% | 999.49 | 459 / 459 | 100% | 4.99 | 1113 / 1118 |
brain | 100% | 861.39 | 2633 / 2642 | 100% | 4.33 | 704 / 705 |
lung | 100% | 854.20 | 577 / 578 | 99% | 3.30 | 1147 / 1155 |
thymus | 100% | 1071.42 | 653 / 653 | 99% | 3.67 | 597 / 605 |
prostate | 100% | 929.64 | 245 / 245 | 99% | 3.41 | 495 / 502 |
intestine | 100% | 918.95 | 966 / 966 | 98% | 3.20 | 516 / 527 |
stomach | 100% | 676.99 | 359 / 359 | 98% | 3.37 | 280 / 286 |
uterus | 100% | 1037.75 | 170 / 170 | 97% | 3.34 | 447 / 459 |
pancreas | 98% | 497.73 | 322 / 328 | 98% | 2.92 | 175 / 178 |
bladder | 100% | 1065.67 | 21 / 21 | 96% | 2.97 | 486 / 504 |
adrenal gland | 100% | 981.48 | 258 / 258 | 94% | 3.31 | 217 / 230 |
skin | 100% | 1181.65 | 1809 / 1809 | 92% | 3.86 | 435 / 472 |
kidney | 100% | 640.66 | 89 / 89 | 91% | 2.40 | 824 / 901 |
ovary | 100% | 1029.80 | 180 / 180 | 85% | 1.75 | 366 / 430 |
liver | 100% | 567.74 | 226 / 226 | 70% | 1.32 | 285 / 406 |
adipose | 100% | 919.89 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 3.36 | 29 / 29 |
spleen | 100% | 920.32 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 3.53 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.97 | 1 / 1 |
blood vessel | 100% | 1070.25 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 724.39 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 567.90 | 838 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 83% | 706.98 | 770 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 65% | 1.54 | 52 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0007224 | Biological process | smoothened signaling pathway |
GO_0070201 | Biological process | regulation of establishment of protein localization |
GO_0005814 | Cellular component | centriole |
GO_0005813 | Cellular component | centrosome |
GO_0036064 | Cellular component | ciliary basal body |
GO_0001917 | Cellular component | photoreceptor inner segment |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | KIAA0586 |
Protein name | Alternative protein KIAA0586 KIAA0586 Protein TALPID3 |
Synonyms | TALPID3 |
Description | FUNCTION: Required for ciliogenesis and sonic hedgehog/SHH signaling. Required for the centrosomal recruitment of RAB8A and for the targeting of centriole satellite proteins to centrosomes such as of PCM1. May play a role in early ciliogenesis in the disappearance of centriolar satellites that preceeds ciliary vesicle formation . Involved in regulation of cell intracellular organization. Involved in regulation of cell polarity (By similarity). Required for asymmetrical localization of CEP120 to daughter centrioles (By similarity). . |
Accessions | G3V2T5 A0A494C0Z1 A0A494C058 ENST00000651596.1 ENST00000650904.1 ENST00000354386.10 [Q9BVV6-3] ENST00000555833.5 H0YJF0 A0A494C110 ENST00000423743.7 [Q9BVV6-4] A0A087WYM5 A0A494C1C3 L0R885 ENST00000652732.1 ENST00000652414.1 ENST00000651937.1 ENST00000619416.4 [Q9BVV6-1] Q9BVV6 G3V4J0 ENST00000554463.5 A0A494C0M8 ENST00000651852.1 A0A494C133 ENST00000651759.1 ENST00000652326.2 A0A494C075 A0A494C171 ENST00000261244.9 [Q9BVV6-2] ENST00000619722.5 ENST00000555397.1 |