Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 20 studies | 48% ± 24% | |
fibroblast | 18 studies | 40% ± 18% | |
oligodendrocyte precursor cell | 15 studies | 81% ± 18% | |
oligodendrocyte | 14 studies | 45% ± 18% | |
glutamatergic neuron | 12 studies | 79% ± 14% | |
GABAergic neuron | 11 studies | 79% ± 20% | |
endothelial cell | 11 studies | 39% ± 17% | |
adipocyte | 10 studies | 32% ± 9% | |
ciliated cell | 9 studies | 26% ± 14% | |
epithelial cell | 8 studies | 45% ± 31% | |
microglial cell | 8 studies | 39% ± 24% | |
smooth muscle cell | 8 studies | 31% ± 23% | |
neuron | 7 studies | 46% ± 16% | |
interneuron | 6 studies | 70% ± 29% | |
Mueller cell | 5 studies | 72% ± 28% | |
type I pneumocyte | 5 studies | 22% ± 5% | |
type II pneumocyte | 5 studies | 27% ± 9% | |
basal cell | 5 studies | 38% ± 26% | |
squamous epithelial cell | 4 studies | 44% ± 21% | |
granule cell | 4 studies | 76% ± 10% | |
pericyte | 4 studies | 30% ± 16% | |
retinal cone cell | 4 studies | 32% ± 8% | |
retinal ganglion cell | 4 studies | 96% ± 5% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 66% ± 12% | |
GABAergic interneuron | 3 studies | 92% ± 8% | |
glial cell | 3 studies | 42% ± 20% | |
macrophage | 3 studies | 37% ± 12% | |
mesothelial cell | 3 studies | 25% ± 8% | |
GABAergic amacrine cell | 3 studies | 40% ± 8% | |
OFF-bipolar cell | 3 studies | 54% ± 32% | |
glycinergic amacrine cell | 3 studies | 48% ± 15% | |
amacrine cell | 3 studies | 29% ± 2% | |
retinal pigment epithelial cell | 3 studies | 57% ± 24% | |
connective tissue cell | 3 studies | 40% ± 25% | |
ependymal cell | 3 studies | 70% ± 1% | |
adventitial cell | 3 studies | 36% ± 21% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 4622.90 | 2630 / 2642 | 99% | 13.32 | 701 / 705 |
ovary | 100% | 2467.10 | 180 / 180 | 99% | 12.98 | 425 / 430 |
breast | 100% | 1839.67 | 459 / 459 | 95% | 7.62 | 1061 / 1118 |
skin | 100% | 2863.80 | 1808 / 1809 | 94% | 13.00 | 444 / 472 |
kidney | 100% | 2704.22 | 89 / 89 | 92% | 8.86 | 832 / 901 |
thymus | 100% | 1806.68 | 652 / 653 | 91% | 6.66 | 553 / 605 |
esophagus | 91% | 2413.38 | 1313 / 1445 | 83% | 5.07 | 152 / 183 |
prostate | 98% | 1194.29 | 241 / 245 | 74% | 2.48 | 369 / 502 |
uterus | 77% | 741.64 | 131 / 170 | 89% | 7.76 | 410 / 459 |
bladder | 90% | 1182.19 | 19 / 21 | 72% | 3.74 | 364 / 504 |
lung | 100% | 2417.35 | 576 / 578 | 62% | 3.34 | 714 / 1155 |
adrenal gland | 100% | 2680.68 | 258 / 258 | 30% | 3.24 | 68 / 230 |
intestine | 70% | 610.72 | 674 / 966 | 53% | 1.75 | 278 / 527 |
pancreas | 34% | 210.59 | 112 / 328 | 67% | 2.50 | 120 / 178 |
eye | 0% | 0 | 0 / 0 | 100% | 16.12 | 80 / 80 |
spleen | 100% | 11074.85 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.72 | 1 / 1 |
adipose | 100% | 1672.79 | 1203 / 1204 | 0% | 0 | 0 / 0 |
stomach | 41% | 337.36 | 147 / 359 | 53% | 1.94 | 153 / 286 |
blood vessel | 94% | 1058.05 | 1256 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 8.51 | 42 / 45 |
heart | 48% | 399.07 | 417 / 861 | 0% | 0 | 0 / 0 |
liver | 32% | 228.69 | 73 / 226 | 6% | 0.28 | 26 / 406 |
peripheral blood | 29% | 258.51 | 266 / 929 | 0% | 0 | 0 / 0 |
muscle | 2% | 15.62 | 18 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0031424 | Biological process | keratinization |
GO_0001533 | Cellular component | cornified envelope |
GO_0016607 | Cellular component | nuclear speck |
GO_0030057 | Cellular component | desmosome |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005515 | Molecular function | protein binding |
Gene name | KAZN |
Protein name | Kazrin, periplakin interacting protein Kazrin |
Synonyms | C1orf196 KAZ HRIHFB2003 KIAA1026 |
Description | FUNCTION: Component of the cornified envelope of keratinocytes. May be involved in the interplay between adherens junctions and desmosomes. The function in the nucleus is not known. . |
Accessions | B0QYQ6 ENST00000361144.9 [Q674X7-3] ENST00000400797.3 [Q674X7-4] A0A1B0GTU0 ENST00000636564.1 ENST00000636203.1 ENST00000376030.7 [Q674X7-1] ENST00000376028.8 ENST00000503743.5 [Q674X7-2] A0A1B0GWK2 Q674X7 ENST00000400798.6 [Q674X7-4] |