Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 7 studies | 23% ± 9% | |
endothelial cell | 5 studies | 23% ± 5% | |
glutamatergic neuron | 4 studies | 31% ± 18% | |
epithelial cell | 3 studies | 24% ± 4% | |
adipocyte | 3 studies | 18% ± 1% | |
GABAergic neuron | 3 studies | 27% ± 13% | |
oligodendrocyte precursor cell | 3 studies | 20% ± 3% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 25% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 8015.89 | 1445 / 1445 | 100% | 55.81 | 183 / 183 |
ovary | 100% | 20559.29 | 180 / 180 | 100% | 47.89 | 430 / 430 |
uterus | 100% | 15193.47 | 170 / 170 | 100% | 73.18 | 459 / 459 |
prostate | 100% | 14395.04 | 245 / 245 | 100% | 64.03 | 501 / 502 |
thymus | 100% | 12306.32 | 653 / 653 | 100% | 48.02 | 602 / 605 |
pancreas | 100% | 5915.50 | 328 / 328 | 99% | 53.79 | 177 / 178 |
intestine | 100% | 9240.90 | 966 / 966 | 99% | 69.41 | 524 / 527 |
skin | 100% | 7356.66 | 1808 / 1809 | 99% | 59.38 | 469 / 472 |
lung | 100% | 6799.20 | 576 / 578 | 100% | 60.04 | 1150 / 1155 |
bladder | 100% | 10370.95 | 21 / 21 | 99% | 79.21 | 500 / 504 |
brain | 99% | 8516.85 | 2616 / 2642 | 100% | 104.57 | 705 / 705 |
stomach | 100% | 6319.64 | 358 / 359 | 99% | 65.29 | 283 / 286 |
breast | 100% | 10589.62 | 459 / 459 | 98% | 50.24 | 1099 / 1118 |
adrenal gland | 100% | 15838.71 | 258 / 258 | 98% | 42.85 | 226 / 230 |
liver | 100% | 6659.29 | 226 / 226 | 97% | 45.15 | 394 / 406 |
kidney | 100% | 9887.66 | 89 / 89 | 93% | 41.97 | 837 / 901 |
adipose | 100% | 9681.10 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 58.06 | 29 / 29 |
spleen | 100% | 12661.32 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 46.27 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 86.60 | 1 / 1 |
blood vessel | 99% | 5991.71 | 1323 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 5008.75 | 843 / 861 | 0% | 0 | 0 / 0 |
muscle | 98% | 5296.38 | 784 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 42.64 | 77 / 80 |
peripheral blood | 52% | 1866.88 | 481 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0106227 | Biological process | peptidyl-lysine glutarylation |
GO_0045995 | Biological process | regulation of embryonic development |
GO_0045721 | Biological process | negative regulation of gluconeogenesis |
GO_0001701 | Biological process | in utero embryonic development |
GO_0048312 | Biological process | intracellular distribution of mitochondria |
GO_0007507 | Biological process | heart development |
GO_0007616 | Biological process | long-term memory |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0090043 | Biological process | regulation of tubulin deacetylation |
GO_0006282 | Biological process | regulation of DNA repair |
GO_0060173 | Biological process | limb development |
GO_2000727 | Biological process | positive regulation of cardiac muscle cell differentiation |
GO_0014070 | Biological process | response to organic cyclic compound |
GO_0018393 | Biological process | internal peptidyl-lysine acetylation |
GO_0035264 | Biological process | multicellular organism growth |
GO_2000036 | Biological process | regulation of stem cell population maintenance |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0006338 | Biological process | chromatin remodeling |
GO_0031346 | Biological process | positive regulation of cell projection organization |
GO_0051302 | Biological process | regulation of cell division |
GO_0022037 | Biological process | metencephalon development |
GO_0071356 | Biological process | cellular response to tumor necrosis factor |
GO_0031667 | Biological process | response to nutrient levels |
GO_0045722 | Biological process | positive regulation of gluconeogenesis |
GO_0048167 | Biological process | regulation of synaptic plasticity |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0045589 | Biological process | regulation of regulatory T cell differentiation |
GO_0006094 | Biological process | gluconeogenesis |
GO_1990090 | Biological process | cellular response to nerve growth factor stimulus |
GO_0046600 | Biological process | negative regulation of centriole replication |
GO_0048144 | Biological process | fibroblast proliferation |
GO_0001756 | Biological process | somitogenesis |
GO_0006355 | Biological process | regulation of DNA-templated transcription |
GO_0001843 | Biological process | neural tube closure |
GO_0050863 | Biological process | regulation of T cell activation |
GO_0061035 | Biological process | regulation of cartilage development |
GO_0043484 | Biological process | regulation of RNA splicing |
GO_1903010 | Biological process | regulation of bone development |
GO_0001819 | Biological process | positive regulation of cytokine production |
GO_0030901 | Biological process | midbrain development |
GO_0051726 | Biological process | regulation of cell cycle |
GO_0031647 | Biological process | regulation of protein stability |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0021537 | Biological process | telencephalon development |
GO_0005615 | Cellular component | extracellular space |
GO_0072686 | Cellular component | mitotic spindle |
GO_0005813 | Cellular component | centrosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0033276 | Cellular component | transcription factor TFTC complex |
GO_0045252 | Cellular component | oxoglutarate dehydrogenase complex |
GO_0140672 | Cellular component | ATAC complex |
GO_0000124 | Cellular component | SAGA complex |
GO_0000123 | Cellular component | histone acetyltransferase complex |
GO_0005634 | Cellular component | nucleus |
GO_0043997 | Molecular function | histone H4K12 acetyltransferase activity |
GO_0140297 | Molecular function | DNA-binding transcription factor binding |
GO_0106078 | Molecular function | histone succinyltransferase activity |
GO_0061733 | Molecular function | peptide-lysine-N-acetyltransferase activity |
GO_0003682 | Molecular function | chromatin binding |
GO_0019903 | Molecular function | protein phosphatase binding |
GO_0010484 | Molecular function | histone H3 acetyltransferase activity |
GO_0106229 | Molecular function | histone glutaryltransferase activity |
GO_0043992 | Molecular function | histone H3K9 acetyltransferase activity |
GO_0004402 | Molecular function | histone acetyltransferase activity |
GO_0003713 | Molecular function | transcription coactivator activity |
GO_0043993 | Molecular function | histone H3K18 acetyltransferase activity |
GO_0005515 | Molecular function | protein binding |
GO_0042826 | Molecular function | histone deacetylase binding |
Gene name | KAT2A |
Protein name | Lysine acetyltransferase 2A Histone acetyltransferase KAT2A (EC 2.3.1.48) (General control of amino acid synthesis protein 5-like 2) (Histone acetyltransferase GCN5) (hGCN5) (Histone glutaryltransferase KAT2A) (EC 2.3.1.-) (Histone succinyltransferase KAT2A) (EC 2.3.1.-) (Lysine acetyltransferase 2A) (STAF97) |
Synonyms | GCN5L2 GCN5 |
Description | FUNCTION: Protein lysine acyltransferase that can act as a acetyltransferase, glutaryltransferase, succinyltransferase or malonyltransferase, depending on the context . Acts as a histone lysine succinyltransferase: catalyzes succinylation of histone H3 on 'Lys-79' (H3K79succ), with a maximum frequency around the transcription start sites of genes . Succinylation of histones gives a specific tag for epigenetic transcription activation . Association with the 2-oxoglutarate dehydrogenase complex, which provides succinyl-CoA, is required for histone succinylation . In different complexes, functions either as an acetyltransferase (HAT) or as a succinyltransferase: in the SAGA and ATAC complexes, acts as a histone acetyltransferase . Has significant histone acetyltransferase activity with core histones, but not with nucleosome core particles . Has a a strong preference for acetylation of H3 at 'Lys-9' (H3K9ac) . Acetylation of histones gives a specific tag for epigenetic transcription activation . Recruited by the XPC complex at promoters, where it specifically mediates acetylation of histone variant H2A.Z.1/H2A.Z, thereby promoting expression of target genes . Involved in long-term memory consolidation and synaptic plasticity: acts by promoting expression of a hippocampal gene expression network linked to neuroactive receptor signaling (By similarity). Acts as a positive regulator of T-cell activation: upon TCR stimulation, recruited to the IL2 promoter following interaction with NFATC2 and catalyzes acetylation of histone H3 at 'Lys-9' (H3K9ac), leading to promote IL2 expression (By similarity). Required for growth and differentiation of craniofacial cartilage and bone by regulating acetylation of histone H3 at 'Lys-9' (H3K9ac) (By similarity). Regulates embryonic stem cell (ESC) pluripotency and differentiation (By similarity). Also acetylates non-histone proteins, such as CEBPB, PPARGC1A, PLK4 and TBX5 . Involved in heart and limb development by mediating acetylation of TBX5, acetylation regulating nucleocytoplasmic shuttling of TBX5 . Acts as a negative regulator of centrosome amplification by mediating acetylation of PLK4 . Acts as a negative regulator of gluconeogenesis by mediating acetylation and subsequent inactivation of PPARGC1A . Also acts as a histone glutaryltransferase: catalyzes glutarylation of histone H4 on 'Lys-91' (H4K91glu), a mark that destabilizes nucleosomes by promoting dissociation of the H2A-H2B dimers from nucleosomes . .; FUNCTION: (Microbial infection) In case of HIV-1 infection, it is recruited by the viral protein Tat. Regulates Tat's transactivating activity and may help inducing chromatin remodeling of proviral genes. . |
Accessions | Q92830 ENST00000225916.10 [Q92830-1] K7EPC4 K7ERS6 ENST00000465682.5 ENST00000588759.1 |