Name | Number of supported studies | Average coverage | |
---|---|---|---|
regulatory T cell | 22 studies | 35% ± 18% | |
oligodendrocyte | 11 studies | 34% ± 12% | |
astrocyte | 10 studies | 33% ± 15% | |
oligodendrocyte precursor cell | 10 studies | 36% ± 15% | |
ciliated cell | 8 studies | 25% ± 8% | |
basal cell | 6 studies | 28% ± 9% | |
gamma-delta T cell | 6 studies | 31% ± 13% | |
club cell | 5 studies | 24% ± 7% | |
natural killer cell | 5 studies | 24% ± 6% | |
microglial cell | 5 studies | 21% ± 2% | |
GABAergic neuron | 4 studies | 28% ± 6% | |
epithelial cell | 4 studies | 46% ± 18% | |
endothelial cell | 3 studies | 22% ± 5% | |
precursor B cell | 3 studies | 33% ± 11% | |
squamous epithelial cell | 3 studies | 44% ± 18% | |
CD16-positive, CD56-dim natural killer cell, human | 3 studies | 19% ± 2% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 20% ± 4% | |
respiratory goblet cell | 3 studies | 29% ± 5% | |
glutamatergic neuron | 3 studies | 37% ± 3% | |
T cell | 3 studies | 25% ± 3% | |
macrophage | 3 studies | 18% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 6 studies | 35% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 2198.68 | 652 / 653 | 97% | 19.26 | 589 / 605 |
prostate | 96% | 1437.98 | 236 / 245 | 88% | 5.24 | 442 / 502 |
lung | 98% | 803.73 | 567 / 578 | 82% | 4.96 | 942 / 1155 |
breast | 94% | 664.92 | 433 / 459 | 75% | 5.27 | 842 / 1118 |
esophagus | 94% | 2717.42 | 1353 / 1445 | 74% | 5.72 | 136 / 183 |
bladder | 86% | 1633.33 | 18 / 21 | 70% | 8.16 | 351 / 504 |
brain | 78% | 380.53 | 2063 / 2642 | 68% | 2.47 | 479 / 705 |
pancreas | 61% | 269.16 | 201 / 328 | 81% | 5.13 | 144 / 178 |
uterus | 66% | 334.54 | 113 / 170 | 74% | 7.50 | 338 / 459 |
ovary | 68% | 281.79 | 122 / 180 | 66% | 2.56 | 285 / 430 |
skin | 100% | 2045.89 | 1800 / 1809 | 23% | 0.86 | 110 / 472 |
intestine | 88% | 512.24 | 848 / 966 | 24% | 1.11 | 129 / 527 |
ureter | 0% | 0 | 0 / 0 | 100% | 8.42 | 1 / 1 |
stomach | 65% | 291.92 | 233 / 359 | 33% | 1.30 | 95 / 286 |
spleen | 98% | 759.66 | 236 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 98% | 771.47 | 1307 / 1335 | 0% | 0 | 0 / 0 |
kidney | 49% | 224.96 | 44 / 89 | 47% | 1.88 | 426 / 901 |
adrenal gland | 84% | 390.28 | 216 / 258 | 10% | 0.27 | 24 / 230 |
adipose | 93% | 670.13 | 1117 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 87% | 9.40 | 39 / 45 |
muscle | 78% | 400.87 | 627 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 69% | 4.30 | 20 / 29 |
heart | 62% | 266.61 | 532 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 46% | 5322.30 | 423 / 929 | 0% | 0 | 0 / 0 |
liver | 24% | 82.10 | 54 / 226 | 5% | 0.17 | 20 / 406 |
eye | 0% | 0 | 0 / 0 | 3% | 0.06 | 2 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008150 | Biological process | biological_process |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | IKZF2 |
Protein name | IKAROS family zinc finger 2 (Zinc finger protein, subfamily 1A, 2 (Helios), isoform CRA_d) (cDNA FLJ55795, highly similar to Zinc finger protein Helios) IKAROS family zinc finger 2 Zinc finger protein Helios (Ikaros family zinc finger protein 2) |
Synonyms | hCG_14830 ZNFN1A2 HELIOS |
Description | FUNCTION: Associates with Ikaros at centromeric heterochromatin. |
Accessions | A0A0A0MT14 ENST00000374319.8 [Q9UKS7-2] ENST00000433134.5 ENST00000457361.5 ENST00000412444.5 [Q9UKS7-5] E7ES26 ENST00000434687.6 [Q9UKS7-1] ENST00000342002.6 E7EUI1 ENST00000374326.7 [Q9UKS7-5] E7EPU0 ENST00000451136.6 B4DWF2 ENST00000439848.5 [Q9UKS7-3] ENST00000452786.2 A0A0A0MSL2 ENST00000453575.5 [Q9UKS7-5] Q9UKS7 ENST00000431520.5 [Q9UKS7-6] ENST00000442445.1 |