Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 19 studies | 55% ± 17% | |
fibroblast | 15 studies | 23% ± 8% | |
endothelial cell | 13 studies | 25% ± 8% | |
pericyte | 11 studies | 21% ± 5% | |
astrocyte | 10 studies | 32% ± 16% | |
endothelial cell of lymphatic vessel | 10 studies | 25% ± 8% | |
smooth muscle cell | 9 studies | 20% ± 3% | |
epithelial cell | 6 studies | 37% ± 13% | |
adipocyte | 6 studies | 21% ± 6% | |
GABAergic neuron | 6 studies | 41% ± 22% | |
interneuron | 5 studies | 38% ± 22% | |
myofibroblast cell | 5 studies | 19% ± 4% | |
retinal rod cell | 5 studies | 23% ± 3% | |
glutamatergic neuron | 5 studies | 52% ± 24% | |
oligodendrocyte precursor cell | 5 studies | 25% ± 8% | |
oligodendrocyte | 5 studies | 27% ± 9% | |
retinal cone cell | 4 studies | 34% ± 13% | |
type I pneumocyte | 4 studies | 19% ± 2% | |
basal cell | 4 studies | 33% ± 12% | |
deuterosomal cell | 3 studies | 33% ± 0% | |
club cell | 3 studies | 19% ± 1% | |
neuron | 3 studies | 31% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1105.57 | 1445 / 1445 | 100% | 10.27 | 183 / 183 |
kidney | 100% | 1763.43 | 89 / 89 | 100% | 18.07 | 901 / 901 |
liver | 100% | 1099.72 | 226 / 226 | 100% | 13.63 | 406 / 406 |
pancreas | 100% | 654.00 | 328 / 328 | 100% | 16.08 | 178 / 178 |
prostate | 100% | 1746.13 | 245 / 245 | 100% | 18.15 | 502 / 502 |
stomach | 100% | 864.55 | 359 / 359 | 100% | 10.48 | 286 / 286 |
thymus | 100% | 1767.73 | 653 / 653 | 100% | 23.00 | 605 / 605 |
uterus | 100% | 1503.14 | 170 / 170 | 100% | 19.26 | 459 / 459 |
ovary | 100% | 1074.90 | 180 / 180 | 100% | 16.04 | 429 / 430 |
brain | 100% | 890.83 | 2635 / 2642 | 100% | 18.08 | 705 / 705 |
skin | 100% | 841.78 | 1807 / 1809 | 100% | 11.40 | 471 / 472 |
breast | 100% | 1101.72 | 459 / 459 | 100% | 17.71 | 1114 / 1118 |
intestine | 100% | 1169.55 | 966 / 966 | 100% | 11.72 | 525 / 527 |
bladder | 100% | 1359.62 | 21 / 21 | 100% | 15.79 | 502 / 504 |
lung | 100% | 1129.33 | 576 / 578 | 100% | 14.13 | 1154 / 1155 |
adrenal gland | 100% | 1085.27 | 258 / 258 | 100% | 13.53 | 229 / 230 |
adipose | 100% | 992.14 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 11.97 | 29 / 29 |
spleen | 100% | 959.66 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 15.55 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 17.48 | 1 / 1 |
blood vessel | 100% | 1316.81 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 985.94 | 853 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 11.19 | 79 / 80 |
muscle | 92% | 352.09 | 741 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 27% | 123.17 | 252 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0035721 | Biological process | intraciliary retrograde transport |
GO_0005814 | Cellular component | centriole |
GO_0097542 | Cellular component | ciliary tip |
GO_0030991 | Cellular component | intraciliary transport particle A |
GO_0005929 | Cellular component | cilium |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0034451 | Cellular component | centriolar satellite |
GO_0005737 | Cellular component | cytoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | IFT43 |
Protein name | Intraflagellar transport protein 43 homolog Intraflagellar transport 43 |
Synonyms | C14orf179 |
Description | FUNCTION: As a component of IFT complex A (IFT-A), a complex required for retrograde ciliary transport and entry into cilia of G protein-coupled receptors (GPCRs), it is involved in ciliogenesis . Involved in retrograde ciliary transport along microtubules from the ciliary tip to the base . . |
Accessions | Q96FT9 ENST00000238628.10 [Q96FT9-2] ENST00000679083.1 ENST00000542766.5 [Q96FT9-1] A0A7I2V6B2 ENST00000556742.1 [Q96FT9-4] ENST00000314067.11 [Q96FT9-1] |