Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell of lymphatic vessel | 10 studies | 23% ± 7% | |
endothelial cell | 5 studies | 22% ± 5% | |
kidney loop of Henle epithelial cell | 4 studies | 25% ± 6% | |
kidney distal convoluted tubule epithelial cell | 3 studies | 50% ± 21% |
Insufficient scRNA-seq data for expression of HOXD8 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 1075.70 | 258 / 258 | 97% | 17.46 | 223 / 230 |
kidney | 100% | 3476.90 | 89 / 89 | 94% | 23.40 | 846 / 901 |
ovary | 100% | 1564.93 | 180 / 180 | 87% | 20.33 | 375 / 430 |
skin | 94% | 474.98 | 1701 / 1809 | 90% | 10.32 | 423 / 472 |
uterus | 100% | 1676.35 | 170 / 170 | 79% | 8.99 | 364 / 459 |
breast | 100% | 1353.30 | 458 / 459 | 79% | 10.20 | 883 / 1118 |
bladder | 100% | 360.10 | 21 / 21 | 59% | 4.67 | 299 / 504 |
prostate | 98% | 432.01 | 239 / 245 | 59% | 3.76 | 296 / 502 |
intestine | 99% | 692.96 | 960 / 966 | 44% | 3.50 | 230 / 527 |
spleen | 100% | 719.26 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.49 | 1 / 1 |
adipose | 100% | 1033.22 | 1203 / 1204 | 0% | 0 | 0 / 0 |
thymus | 83% | 244.17 | 541 / 653 | 17% | 0.74 | 101 / 605 |
esophagus | 56% | 131.29 | 802 / 1445 | 41% | 2.64 | 75 / 183 |
muscle | 87% | 295.79 | 699 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 79% | 448.84 | 1053 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 56% | 3.76 | 25 / 45 |
stomach | 23% | 49.35 | 82 / 359 | 32% | 2.20 | 91 / 286 |
lung | 11% | 23.24 | 66 / 578 | 31% | 2.59 | 354 / 1155 |
pancreas | 4% | 6.27 | 12 / 328 | 37% | 1.73 | 66 / 178 |
brain | 6% | 24.69 | 147 / 2642 | 31% | 4.25 | 221 / 705 |
eye | 0% | 0 | 0 / 0 | 5% | 0.21 | 4 / 80 |
liver | 0% | 0 | 0 / 226 | 4% | 0.20 | 17 / 406 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.15 | 1 / 29 |
heart | 3% | 7.31 | 28 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0.30 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0008595 | Biological process | anterior/posterior axis specification, embryo |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0048705 | Biological process | skeletal system morphogenesis |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0000977 | Molecular function | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Gene name | HOXD8 |
Protein name | Homeobox protein Hox-D8 Homeobox protein Hox-D8 (Homeobox protein Hox-4E) (Homeobox protein Hox-5.4) |
Synonyms | HOX4E |
Description | FUNCTION: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. FUNCTION: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. . FUNCTION: Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. . |
Accessions | ENST00000450510.2 [P13378-2] P13378 A0A0A0MTF4 ENST00000313173.6 [P13378-1] A0A0A0MSX5 ENST00000544999.2 ENST00000429017.2 |