Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 17 studies | 52% ± 17% | |
type II pneumocyte | 10 studies | 45% ± 16% | |
mesothelial cell | 6 studies | 35% ± 19% | |
smooth muscle cell | 5 studies | 42% ± 20% | |
myofibroblast cell | 5 studies | 44% ± 14% | |
connective tissue cell | 4 studies | 24% ± 8% | |
fibroblast | 4 studies | 33% ± 15% | |
GABAergic neuron | 4 studies | 28% ± 8% | |
glutamatergic neuron | 4 studies | 34% ± 11% | |
oligodendrocyte precursor cell | 4 studies | 18% ± 2% | |
endothelial cell | 3 studies | 19% ± 1% | |
OFF-bipolar cell | 3 studies | 45% ± 18% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 9 studies | 32% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 86% | 462.24 | 210 / 245 | 79% | 3.62 | 396 / 502 |
brain | 99% | 1318.68 | 2603 / 2642 | 60% | 2.86 | 420 / 705 |
lung | 76% | 1810.01 | 440 / 578 | 43% | 2.82 | 491 / 1155 |
stomach | 78% | 610.10 | 279 / 359 | 40% | 1.29 | 114 / 286 |
adrenal gland | 93% | 569.10 | 241 / 258 | 11% | 0.45 | 25 / 230 |
liver | 94% | 572.42 | 212 / 226 | 10% | 0.40 | 42 / 406 |
pancreas | 49% | 182.63 | 161 / 328 | 52% | 1.73 | 92 / 178 |
intestine | 58% | 649.51 | 561 / 966 | 31% | 0.77 | 166 / 527 |
bladder | 67% | 1650.67 | 14 / 21 | 21% | 0.66 | 104 / 504 |
kidney | 54% | 142.88 | 48 / 89 | 14% | 0.85 | 126 / 901 |
thymus | 48% | 152.79 | 316 / 653 | 11% | 0.54 | 68 / 605 |
adipose | 49% | 299.36 | 595 / 1204 | 0% | 0 | 0 / 0 |
esophagus | 9% | 21.07 | 126 / 1445 | 26% | 1.01 | 47 / 183 |
ovary | 24% | 85.29 | 43 / 180 | 8% | 0.17 | 36 / 430 |
breast | 24% | 66.46 | 112 / 459 | 2% | 0.04 | 19 / 1118 |
blood vessel | 26% | 66.64 | 345 / 1335 | 0% | 0 | 0 / 0 |
skin | 22% | 169.89 | 404 / 1809 | 2% | 0.05 | 11 / 472 |
uterus | 11% | 67.34 | 18 / 170 | 11% | 0.77 | 51 / 459 |
muscle | 12% | 45.95 | 95 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.05 | 1 / 45 |
heart | 2% | 4.43 | 19 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 2% | 3.90 | 14 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0009968 | Biological process | negative regulation of signal transduction |
GO_0007165 | Biological process | signal transduction |
GO_0060441 | Biological process | epithelial tube branching involved in lung morphogenesis |
GO_0040036 | Biological process | regulation of fibroblast growth factor receptor signaling pathway |
GO_0045879 | Biological process | negative regulation of smoothened signaling pathway |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0009953 | Biological process | dorsal/ventral pattern formation |
GO_0048705 | Biological process | skeletal system morphogenesis |
GO_0007405 | Biological process | neuroblast proliferation |
GO_0060170 | Cellular component | ciliary membrane |
GO_0009986 | Cellular component | cell surface |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0097108 | Molecular function | hedgehog family protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | HHIP |
Protein name | Hedgehog-interacting protein (HHIP) (HIP) |
Synonyms | HIP UNQ5825/PRO19644 |
Description | FUNCTION: Modulates hedgehog signaling in several cell types including brain and lung through direct interaction with members of the hedgehog family. . |
Accessions | Q96QV1 ENST00000296575.8 [Q96QV1-1] ENST00000434550.2 [Q96QV1-2] |