Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 12 studies | 69% ± 26% | |
GABAergic neuron | 9 studies | 61% ± 25% | |
oligodendrocyte | 8 studies | 29% ± 17% | |
retinal ganglion cell | 6 studies | 46% ± 14% | |
neuron | 5 studies | 39% ± 18% | |
interneuron | 4 studies | 57% ± 23% | |
endothelial cell | 3 studies | 43% ± 19% | |
microglial cell | 3 studies | 36% ± 21% | |
GABAergic amacrine cell | 3 studies | 29% ± 10% | |
amacrine cell | 3 studies | 41% ± 13% | |
ependymal cell | 3 studies | 47% ± 3% | |
granule cell | 3 studies | 74% ± 17% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 16 studies | 41% ± 25% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 96% | 3435.02 | 2526 / 2642 | 66% | 4.98 | 462 / 705 |
heart | 69% | 498.17 | 591 / 861 | 0% | 0 | 0 / 0 |
kidney | 31% | 162.16 | 28 / 89 | 30% | 1.74 | 266 / 901 |
esophagus | 43% | 357.97 | 623 / 1445 | 10% | 0.25 | 19 / 183 |
stomach | 42% | 203.84 | 149 / 359 | 11% | 0.31 | 31 / 286 |
ovary | 8% | 29.27 | 15 / 180 | 42% | 2.31 | 181 / 430 |
uterus | 39% | 157.84 | 66 / 170 | 12% | 0.83 | 53 / 459 |
thymus | 30% | 85.12 | 195 / 653 | 10% | 0.25 | 62 / 605 |
tonsil | 0% | 0 | 0 / 0 | 36% | 3.20 | 16 / 45 |
adrenal gland | 2% | 9.21 | 6 / 258 | 33% | 1.18 | 75 / 230 |
bladder | 24% | 75.29 | 5 / 21 | 3% | 0.08 | 13 / 504 |
intestine | 21% | 72.63 | 202 / 966 | 4% | 0.14 | 23 / 527 |
blood vessel | 22% | 85.28 | 289 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 21% | 0.90 | 17 / 80 |
skin | 17% | 51.48 | 305 / 1809 | 4% | 0.19 | 20 / 472 |
adipose | 19% | 61.17 | 231 / 1204 | 0% | 0 | 0 / 0 |
breast | 12% | 32.42 | 53 / 459 | 6% | 0.21 | 68 / 1118 |
pancreas | 1% | 4.65 | 4 / 328 | 15% | 0.27 | 27 / 178 |
lung | 2% | 4.29 | 11 / 578 | 12% | 0.47 | 143 / 1155 |
prostate | 12% | 38.62 | 30 / 245 | 0% | 0.01 | 2 / 502 |
liver | 0% | 0 | 0 / 226 | 9% | 0.31 | 38 / 406 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.26 | 2 / 29 |
muscle | 2% | 4.86 | 15 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 2.91 | 6 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0019233 | Biological process | sensory perception of pain |
GO_0042177 | Biological process | negative regulation of protein catabolic process |
GO_0097553 | Biological process | calcium ion transmembrane import into cytosol |
GO_0019722 | Biological process | calcium-mediated signaling |
GO_1903539 | Biological process | protein localization to postsynaptic membrane |
GO_0007611 | Biological process | learning or memory |
GO_0030431 | Biological process | sleep |
GO_0060079 | Biological process | excitatory postsynaptic potential |
GO_0035235 | Biological process | ionotropic glutamate receptor signaling pathway |
GO_0042417 | Biological process | dopamine metabolic process |
GO_0098976 | Biological process | excitatory chemical synaptic transmission |
GO_0060291 | Biological process | long-term synaptic potentiation |
GO_0045471 | Biological process | response to ethanol |
GO_0033058 | Biological process | directional locomotion |
GO_2000463 | Biological process | positive regulation of excitatory postsynaptic potential |
GO_0008542 | Biological process | visual learning |
GO_0097202 | Biological process | activation of cysteine-type endopeptidase activity |
GO_0048167 | Biological process | regulation of synaptic plasticity |
GO_1904062 | Biological process | regulation of monoatomic cation transmembrane transport |
GO_0022008 | Biological process | neurogenesis |
GO_0048168 | Biological process | regulation of neuronal synaptic plasticity |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_0098655 | Biological process | monoatomic cation transmembrane transport |
GO_0030163 | Biological process | protein catabolic process |
GO_0007420 | Biological process | brain development |
GO_0007613 | Biological process | memory |
GO_0001964 | Biological process | startle response |
GO_0051968 | Biological process | positive regulation of synaptic transmission, glutamatergic |
GO_0001975 | Biological process | response to amphetamine |
GO_0009410 | Biological process | response to xenobiotic stimulus |
GO_0042428 | Biological process | serotonin metabolic process |
GO_0007215 | Biological process | glutamate receptor signaling pathway |
GO_0043065 | Biological process | positive regulation of apoptotic process |
GO_0009611 | Biological process | response to wounding |
GO_1904646 | Biological process | cellular response to amyloid-beta |
GO_0035249 | Biological process | synaptic transmission, glutamatergic |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0098839 | Cellular component | postsynaptic density membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0043197 | Cellular component | dendritic spine |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0097060 | Cellular component | synaptic membrane |
GO_0042734 | Cellular component | presynaptic membrane |
GO_0009986 | Cellular component | cell surface |
GO_0008021 | Cellular component | synaptic vesicle |
GO_0014069 | Cellular component | postsynaptic density |
GO_0045211 | Cellular component | postsynaptic membrane |
GO_0017146 | Cellular component | NMDA selective glutamate receptor complex |
GO_0030659 | Cellular component | cytoplasmic vesicle membrane |
GO_1904315 | Molecular function | transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential |
GO_0004972 | Molecular function | NMDA glutamate receptor activity |
GO_0001540 | Molecular function | amyloid-beta binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0022849 | Molecular function | glutamate-gated calcium ion channel activity |
GO_0005515 | Molecular function | protein binding |
Gene name | GRIN2A |
Protein name | Glutamate receptor Glutamate ionotropic receptor NMDA type subunit 2A Glutamate receptor ionotropic, NMDA 2A (GluN2A) (Glutamate [NMDA] receptor subunit epsilon-1) (N-methyl D-aspartate receptor subtype 2A) (NMDAR2A) (NR2A) (hNR2A) |
Synonyms | NR2A NMDAR2A hCG_14641 |
Description | FUNCTION: Component of NMDA receptor complexes that function as heterotetrameric, ligand-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Channel activation requires binding of the neurotransmitter glutamate to the epsilon subunit, glycine binding to the zeta subunit, plus membrane depolarization to eliminate channel inhibition by Mg(2+) . Sensitivity to glutamate and channel kinetics depend on the subunit composition; channels containing GRIN1 and GRIN2A have lower sensitivity to glutamate and faster deactivation kinetics than channels formed by GRIN1 and GRIN2B . Contributes to the slow phase of excitatory postsynaptic current, long-term synaptic potentiation, and learning (By similarity). . FUNCTION: Receptor for glutamate that functions as a ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. . FUNCTION: Receptor for glutamate that functions as a ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. . FUNCTION: Receptor for glutamate that functions as a ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. . FUNCTION: Receptor for glutamate that functions as a ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. . FUNCTION: Receptor for glutamate that functions as a ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. . |
Accessions | A0A890YTL4 A0A1B0GUT1 ENST00000674742.1 A0A6Q8PGD2 ENST00000330684.4 [Q12879-1] ENST00000562109.5 [Q12879-2] A0A1B0GU35 Q12879 ENST00000637393.1 ENST00000396573.6 [Q12879-1] ENST00000637188.1 ENST00000535259.6 A0A6Q8PHM7 ENST00000675398.1 ENST00000636406.1 F5GZ52 Q547U9 A0A1B0GVW1 |