Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 23 studies | 25% ± 8% | |
endothelial cell | 18 studies | 28% ± 13% | |
ciliated cell | 17 studies | 36% ± 11% | |
astrocyte | 16 studies | 38% ± 20% | |
oligodendrocyte precursor cell | 12 studies | 39% ± 20% | |
oligodendrocyte | 12 studies | 40% ± 16% | |
glutamatergic neuron | 11 studies | 53% ± 25% | |
epithelial cell | 10 studies | 36% ± 15% | |
GABAergic neuron | 10 studies | 51% ± 25% | |
macrophage | 10 studies | 25% ± 8% | |
basal cell | 9 studies | 26% ± 13% | |
pericyte | 8 studies | 21% ± 7% | |
microglial cell | 8 studies | 29% ± 11% | |
smooth muscle cell | 8 studies | 23% ± 5% | |
endothelial cell of lymphatic vessel | 7 studies | 23% ± 5% | |
type I pneumocyte | 7 studies | 24% ± 5% | |
neuron | 6 studies | 43% ± 15% | |
myeloid cell | 6 studies | 22% ± 5% | |
club cell | 6 studies | 29% ± 8% | |
retina horizontal cell | 6 studies | 26% ± 8% | |
adipocyte | 6 studies | 25% ± 5% | |
dendritic cell | 6 studies | 20% ± 7% | |
type II pneumocyte | 6 studies | 21% ± 4% | |
connective tissue cell | 6 studies | 26% ± 6% | |
respiratory goblet cell | 5 studies | 31% ± 9% | |
retinal ganglion cell | 5 studies | 25% ± 7% | |
amacrine cell | 5 studies | 30% ± 6% | |
mucus secreting cell | 5 studies | 27% ± 6% | |
Mueller cell | 5 studies | 20% ± 2% | |
myofibroblast cell | 5 studies | 23% ± 9% | |
goblet cell | 5 studies | 36% ± 20% | |
natural killer cell | 4 studies | 17% ± 2% | |
secretory cell | 4 studies | 23% ± 5% | |
T cell | 4 studies | 19% ± 1% | |
B cell | 4 studies | 19% ± 3% | |
retinal bipolar neuron | 4 studies | 21% ± 3% | |
retinal cone cell | 4 studies | 20% ± 3% | |
retinal pigment epithelial cell | 4 studies | 44% ± 13% | |
cardiac muscle cell | 4 studies | 23% ± 3% | |
mesothelial cell | 4 studies | 28% ± 12% | |
lymphocyte | 4 studies | 26% ± 3% | |
abnormal cell | 4 studies | 35% ± 13% | |
monocyte | 4 studies | 23% ± 2% | |
interneuron | 4 studies | 73% ± 18% | |
ionocyte | 3 studies | 28% ± 6% | |
plasma cell | 3 studies | 31% ± 9% | |
serous secreting cell | 3 studies | 17% ± 1% | |
GABAergic amacrine cell | 3 studies | 34% ± 8% | |
glycinergic amacrine cell | 3 studies | 33% ± 2% | |
rod bipolar cell | 3 studies | 24% ± 6% | |
endothelial cell of vascular tree | 3 studies | 20% ± 5% | |
muscle cell | 3 studies | 27% ± 16% | |
adventitial cell | 3 studies | 20% ± 3% | |
alveolar macrophage | 3 studies | 24% ± 5% | |
transit amplifying cell | 3 studies | 33% ± 22% | |
granule cell | 3 studies | 34% ± 9% | |
hepatocyte | 3 studies | 39% ± 11% | |
mast cell | 3 studies | 20% ± 5% | |
luminal cell of prostate epithelium | 3 studies | 28% ± 5% | |
kidney loop of Henle epithelial cell | 3 studies | 18% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 5849.60 | 2642 / 2642 | 100% | 75.81 | 705 / 705 |
prostate | 100% | 5471.24 | 245 / 245 | 100% | 83.82 | 502 / 502 |
breast | 100% | 4471.05 | 459 / 459 | 100% | 57.67 | 1115 / 1118 |
esophagus | 100% | 3303.75 | 1440 / 1445 | 100% | 44.85 | 183 / 183 |
lung | 100% | 4381.65 | 577 / 578 | 100% | 43.99 | 1153 / 1155 |
ovary | 100% | 5283.31 | 180 / 180 | 100% | 38.77 | 428 / 430 |
kidney | 100% | 3458.34 | 89 / 89 | 99% | 62.58 | 896 / 901 |
thymus | 100% | 6477.18 | 653 / 653 | 99% | 71.99 | 598 / 605 |
adrenal gland | 100% | 8508.30 | 258 / 258 | 99% | 68.26 | 227 / 230 |
stomach | 100% | 3037.41 | 359 / 359 | 99% | 41.35 | 282 / 286 |
intestine | 100% | 4115.45 | 966 / 966 | 98% | 40.42 | 519 / 527 |
bladder | 100% | 3919.38 | 21 / 21 | 98% | 34.16 | 496 / 504 |
pancreas | 99% | 2190.54 | 324 / 328 | 98% | 52.50 | 175 / 178 |
uterus | 100% | 5161.36 | 170 / 170 | 96% | 29.23 | 439 / 459 |
liver | 100% | 2542.97 | 226 / 226 | 93% | 24.99 | 377 / 406 |
skin | 97% | 3049.42 | 1759 / 1809 | 86% | 28.27 | 407 / 472 |
adipose | 100% | 4596.44 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 6198.62 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 2686.77 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 17.33 | 1 / 1 |
muscle | 99% | 1678.45 | 791 / 803 | 0% | 0 | 0 / 0 |
heart | 94% | 2509.65 | 812 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 18.13 | 41 / 45 |
lymph node | 0% | 0 | 0 / 0 | 90% | 18.83 | 26 / 29 |
peripheral blood | 77% | 2037.98 | 714 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 53% | 10.11 | 42 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0016020 | Cellular component | membrane |
Gene name | GOLM2 |
Protein name | Golgi membrane protein 2 Protein GOLM2 (Cancer susceptibility candidate gene 4 protein) (CASC4) (Golgi membrane protein 2) Protein GOLM2 (Golgi membrane protein 2) |
Synonyms | hCG_2003796 UNQ2573/PRO6308 CASC4 |
Description | |
Accessions | ENST00000557945.5 [Q6P4E1-3] ENST00000559222.5 ENST00000561305.1 ENST00000558847.1 H0YN36 ENST00000345795.6 [Q6P4E1-2] Q6P4E1 H0YM51 H0YKJ7 H0YMR0 ENST00000299957.11 [Q6P4E1-4] A0A3B3IRW9 ENST00000650436.1 Q8N7K6 ENST00000558735.1 |