Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 33 studies | 27% ± 9% | |
classical monocyte | 21 studies | 28% ± 10% | |
endothelial cell | 19 studies | 22% ± 6% | |
non-classical monocyte | 19 studies | 34% ± 11% | |
monocyte | 16 studies | 26% ± 7% | |
myeloid cell | 10 studies | 27% ± 12% | |
ciliated cell | 9 studies | 23% ± 7% | |
alveolar macrophage | 8 studies | 26% ± 8% | |
epithelial cell | 6 studies | 31% ± 13% | |
conventional dendritic cell | 5 studies | 21% ± 4% | |
dendritic cell | 5 studies | 23% ± 6% | |
mononuclear phagocyte | 5 studies | 24% ± 3% | |
vein endothelial cell | 5 studies | 21% ± 6% | |
endothelial cell of lymphatic vessel | 4 studies | 18% ± 4% | |
microglial cell | 4 studies | 20% ± 6% | |
fibroblast | 4 studies | 19% ± 2% | |
abnormal cell | 4 studies | 20% ± 3% | |
glutamatergic neuron | 4 studies | 40% ± 16% | |
retinal pigment epithelial cell | 3 studies | 32% ± 14% | |
tissue-resident macrophage | 3 studies | 24% ± 1% | |
endothelial cell of vascular tree | 3 studies | 20% ± 3% | |
mast cell | 3 studies | 20% ± 4% | |
inflammatory macrophage | 3 studies | 21% ± 7% | |
GABAergic neuron | 3 studies | 43% ± 7% | |
basal cell | 3 studies | 19% ± 4% | |
adipocyte | 3 studies | 17% ± 1% | |
astrocyte | 3 studies | 25% ± 1% | |
oligodendrocyte | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 12413.38 | 89 / 89 | 100% | 215.23 | 900 / 901 |
lung | 100% | 12999.91 | 578 / 578 | 100% | 132.39 | 1153 / 1155 |
breast | 100% | 13214.10 | 459 / 459 | 100% | 154.23 | 1115 / 1118 |
adrenal gland | 100% | 42112.90 | 258 / 258 | 100% | 215.96 | 229 / 230 |
skin | 100% | 8960.14 | 1808 / 1809 | 100% | 239.21 | 470 / 472 |
bladder | 100% | 9606.81 | 21 / 21 | 99% | 95.40 | 500 / 504 |
ovary | 100% | 12948.52 | 180 / 180 | 99% | 81.71 | 426 / 430 |
stomach | 100% | 6229.04 | 359 / 359 | 99% | 95.58 | 283 / 286 |
prostate | 100% | 6209.16 | 244 / 245 | 99% | 100.66 | 498 / 502 |
thymus | 100% | 10143.94 | 653 / 653 | 99% | 113.47 | 596 / 605 |
intestine | 100% | 7823.51 | 966 / 966 | 98% | 83.48 | 517 / 527 |
uterus | 100% | 11318.59 | 170 / 170 | 98% | 80.19 | 449 / 459 |
esophagus | 98% | 6566.92 | 1420 / 1445 | 99% | 96.54 | 181 / 183 |
pancreas | 90% | 3261.23 | 295 / 328 | 99% | 109.93 | 176 / 178 |
liver | 85% | 3632.31 | 191 / 226 | 100% | 85.22 | 406 / 406 |
brain | 86% | 2664.61 | 2259 / 2642 | 97% | 79.99 | 686 / 705 |
adipose | 100% | 16501.19 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 11740.00 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 182.35 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 93.59 | 29 / 29 |
spleen | 100% | 9065.88 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 76.90 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 34.27 | 1 / 1 |
peripheral blood | 99% | 12165.81 | 919 / 929 | 0% | 0 | 0 / 0 |
muscle | 98% | 4249.60 | 790 / 803 | 0% | 0 | 0 / 0 |
heart | 95% | 7419.30 | 821 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006027 | Biological process | glycosaminoglycan catabolic process |
GO_0042340 | Biological process | keratan sulfate catabolic process |
GO_0035578 | Cellular component | azurophil granule lumen |
GO_0043202 | Cellular component | lysosomal lumen |
GO_1904813 | Cellular component | ficolin-1-rich granule lumen |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005576 | Cellular component | extracellular region |
GO_0008484 | Molecular function | sulfuric ester hydrolase activity |
GO_0043199 | Molecular function | sulfate binding |
GO_0008449 | Molecular function | N-acetylglucosamine-6-sulfatase activity |
GO_0005515 | Molecular function | protein binding |
GO_0005539 | Molecular function | glycosaminoglycan binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | GNS |
Protein name | N-acetylglucosamine-6-sulfatase (EC 3.1.6.14) (Glucosamine-6-sulfatase) (G6S) N-acetylglucosamine-6-sulfatase (EC 3.1.6.14) (Glucosamine-6-sulfatase) Glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID), isoform CRA_a (Glucosamine-6-sulfatase isoform 1) Glucosamine-6-sulfatase isoform 2 Glucosamine (N-acetyl)-6-sulfatase |
Synonyms | hCG_1640559 |
Description | |
Accessions | ENST00000542058.5 [P15586-2] A0A024RBC5 H7C3P4 H0YFA9 P15586 F6S8M0 ENST00000418919.6 ENST00000543646.5 ENST00000545273.1 F5H4C6 ENST00000258145.8 [P15586-1] A0A0S2Z3S2 ENST00000540196.5 |