Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 14 studies | 29% ± 7% | |
classical monocyte | 12 studies | 23% ± 6% | |
non-classical monocyte | 10 studies | 23% ± 6% | |
endothelial cell | 8 studies | 21% ± 6% | |
conventional dendritic cell | 6 studies | 30% ± 12% | |
natural killer cell | 6 studies | 17% ± 2% | |
fibroblast | 6 studies | 23% ± 5% | |
plasmacytoid dendritic cell | 6 studies | 23% ± 4% | |
CD16-positive, CD56-dim natural killer cell, human | 5 studies | 18% ± 1% | |
myeloid cell | 5 studies | 23% ± 5% | |
epithelial cell | 5 studies | 36% ± 13% | |
astrocyte | 5 studies | 24% ± 6% | |
abnormal cell | 5 studies | 28% ± 12% | |
oligodendrocyte | 5 studies | 27% ± 9% | |
dendritic cell | 5 studies | 27% ± 9% | |
basal cell | 4 studies | 25% ± 6% | |
monocyte | 4 studies | 18% ± 1% | |
ciliated cell | 4 studies | 21% ± 3% | |
gamma-delta T cell | 4 studies | 18% ± 1% | |
secretory cell | 3 studies | 23% ± 4% | |
B cell | 3 studies | 17% ± 2% | |
intermediate monocyte | 3 studies | 27% ± 4% | |
regulatory T cell | 3 studies | 17% ± 0% | |
GABAergic neuron | 3 studies | 37% ± 13% | |
glutamatergic neuron | 3 studies | 45% ± 18% | |
oligodendrocyte precursor cell | 3 studies | 25% ± 7% | |
CD16-negative, CD56-bright natural killer cell, human | 3 studies | 16% ± 1% | |
double negative thymocyte | 3 studies | 16% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 9503.21 | 258 / 258 | 100% | 100.74 | 230 / 230 |
liver | 100% | 2534.34 | 226 / 226 | 100% | 55.48 | 406 / 406 |
ovary | 100% | 2734.66 | 180 / 180 | 100% | 39.42 | 430 / 430 |
pancreas | 100% | 1936.10 | 328 / 328 | 100% | 45.50 | 178 / 178 |
skin | 100% | 2543.37 | 1809 / 1809 | 100% | 70.39 | 472 / 472 |
uterus | 100% | 2689.54 | 170 / 170 | 100% | 41.77 | 459 / 459 |
brain | 100% | 4225.50 | 2641 / 2642 | 100% | 81.69 | 705 / 705 |
lung | 100% | 2861.07 | 578 / 578 | 100% | 40.65 | 1154 / 1155 |
thymus | 100% | 3203.18 | 653 / 653 | 100% | 65.43 | 604 / 605 |
kidney | 100% | 3149.12 | 89 / 89 | 100% | 69.40 | 899 / 901 |
intestine | 100% | 2543.57 | 966 / 966 | 100% | 34.62 | 525 / 527 |
prostate | 100% | 2614.33 | 245 / 245 | 100% | 54.77 | 500 / 502 |
esophagus | 100% | 2265.15 | 1445 / 1445 | 99% | 25.02 | 182 / 183 |
breast | 100% | 3013.59 | 459 / 459 | 99% | 51.43 | 1110 / 1118 |
stomach | 100% | 2339.04 | 359 / 359 | 99% | 32.34 | 283 / 286 |
bladder | 100% | 2586.90 | 21 / 21 | 99% | 39.28 | 498 / 504 |
adipose | 100% | 3053.01 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 66.80 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 35.16 | 29 / 29 |
spleen | 100% | 3158.56 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 31.57 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 28.78 | 1 / 1 |
blood vessel | 100% | 2645.98 | 1333 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 1407.83 | 794 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1570.63 | 849 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 95% | 1325.02 | 884 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0046835 | Biological process | carbohydrate phosphorylation |
GO_0016256 | Biological process | N-glycan processing to lysosome |
GO_0000139 | Cellular component | Golgi membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0070622 | Cellular component | UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex |
GO_0042803 | Molecular function | protein homodimerization activity |
GO_0005515 | Molecular function | protein binding |
GO_0003976 | Molecular function | UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity |
Gene name | GNPTG |
Protein name | N-acetylglucosamine-1-phosphate transferase, gamma subunit, isoform CRA_b (Similar to protein kinase C substrate) N-acetylglucosamine-1-phosphate transferase subunit gamma N-acetylglucosamine-1-phosphotransferase subunit gamma (GlcNAc-1-phosphotransferase subunit gamma) (UDP-N-acetylglucosamine-1-phosphotransferase subunit gamma) GNPTG protein |
Synonyms | CAB56184 GNPTAG hCG_42715 LP2537 RJD9 C16orf27 |
Description | FUNCTION: Non-catalytic subunit of the N-acetylglucosamine-1-phosphotransferase complex, an enzyme that catalyzes the formation of mannose 6-phosphate (M6P) markers on high mannose type oligosaccharides in the Golgi apparatus. Binds and presents the high mannose glycans of the acceptor to the catalytic alpha and beta subunits (GNPTAB). Enhances the rate of N-acetylglucosamine-1-phosphate transfer to the oligosaccharides of acid hydrolase acceptors. . |
Accessions | ENST00000683366.1 A0A804HIZ1 ENST00000526820.5 H0YEA7 Q96RZ2 ENST00000529110.2 ENST00000527137.2 ENST00000683887.1 A0A087WWA2 A0A804HI41 Q9UJJ9 A2VDJ4 E9PQQ5 ENST00000204679.9 |