GNLY report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	49 studies	78% ± 20%	Explore
CD8-positive, alpha-beta T cell	22 studies	40% ± 16%	Explore
mature NK T cell	20 studies	73% ± 21%	Explore
gamma-delta T cell	19 studies	53% ± 17%	Explore
CD16-positive, CD56-dim natural killer cell, human	17 studies	90% ± 10%	Explore
T cell	16 studies	30% ± 14%	Explore
CD16-negative, CD56-bright natural killer cell, human	16 studies	78% ± 24%	Explore
mucosal invariant T cell	13 studies	32% ± 11%	Explore
effector memory CD8-positive, alpha-beta T cell	12 studies	36% ± 20%	Explore
CD8-positive, alpha-beta memory T cell	11 studies	36% ± 15%	Explore
innate lymphoid cell	9 studies	53% ± 26%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	60% ± 19%	Explore
platelet	6 studies	31% ± 13%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	75% ± 8%	Explore
CD4-positive, alpha-beta cytotoxic T cell	4 studies	41% ± 10%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	4 studies	43% ± 20%	Explore
CD4-positive, alpha-beta memory T cell	4 studies	25% ± 11%	Explore
central memory CD8-positive, alpha-beta T cell	3 studies	27% ± 8%	Explore
CD4-positive, alpha-beta T cell	3 studies	41% ± 31%	Explore
erythrocyte	3 studies	39% ± 10%	Explore
lymphocyte	3 studies	32% ± 16%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	19 studies	28% ± 9%	Explore
lung	3 studies	20% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	100%	1873.10	576 / 578	82%	18.49	947 / 1155
thymus	80%	222.67	523 / 653	73%	15.83	439 / 605
uterus	76%	248.48	129 / 170	74%	24.55	339 / 459
breast	98%	336.95	449 / 459	52%	6.20	576 / 1118
kidney	62%	127.37	55 / 89	69%	9.20	622 / 901
esophagus	61%	102.76	876 / 1445	61%	9.55	111 / 183
intestine	57%	135.44	549 / 966	57%	8.04	303 / 527
liver	82%	285.90	185 / 226	31%	2.99	124 / 406
bladder	57%	124.10	12 / 21	53%	11.75	269 / 504
spleen	100%	2777.95	241 / 241	0%	0	0 / 0
stomach	37%	65.59	133 / 359	61%	7.77	175 / 286
adipose	97%	405.23	1165 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	97%	65.76	28 / 29
tonsil	0%	0	0 / 0	91%	31.97	41 / 45
peripheral blood	86%	14095.00	800 / 929	0%	0	0 / 0
prostate	65%	123.53	160 / 245	20%	1.27	102 / 502
brain	52%	95.22	1367 / 2642	29%	2.88	206 / 705
ovary	27%	58.25	49 / 180	51%	7.15	219 / 430
skin	20%	28.66	359 / 1809	54%	9.00	256 / 472
muscle	72%	263.85	579 / 803	0%	0	0 / 0
pancreas	5%	5.88	16 / 328	57%	5.21	101 / 178
heart	57%	118.63	489 / 861	0%	0	0 / 0
blood vessel	44%	89.95	592 / 1335	0%	0	0 / 0
adrenal gland	15%	21.05	39 / 258	18%	1.49	41 / 230
eye	0%	0	0 / 0	10%	0.65	8 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1