Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 30 studies | 27% ± 10% | |
endothelial cell | 24 studies | 28% ± 9% | |
pericyte | 21 studies | 23% ± 6% | |
smooth muscle cell | 13 studies | 25% ± 5% | |
connective tissue cell | 12 studies | 24% ± 8% | |
endothelial cell of lymphatic vessel | 11 studies | 24% ± 6% | |
capillary endothelial cell | 10 studies | 20% ± 4% | |
myofibroblast cell | 10 studies | 26% ± 9% | |
endothelial cell of artery | 9 studies | 21% ± 2% | |
endothelial cell of vascular tree | 8 studies | 21% ± 6% | |
B cell | 7 studies | 19% ± 3% | |
basal cell | 7 studies | 28% ± 12% | |
memory B cell | 7 studies | 17% ± 1% | |
vein endothelial cell | 7 studies | 21% ± 8% | |
plasmacytoid dendritic cell | 7 studies | 21% ± 6% | |
epithelial cell | 6 studies | 37% ± 18% | |
oligodendrocyte | 6 studies | 27% ± 9% | |
epithelial cell of proximal tubule | 5 studies | 19% ± 2% | |
astrocyte | 5 studies | 25% ± 7% | |
classical monocyte | 4 studies | 22% ± 5% | |
non-classical monocyte | 4 studies | 25% ± 7% | |
conventional dendritic cell | 4 studies | 24% ± 5% | |
type I pneumocyte | 4 studies | 20% ± 3% | |
adventitial cell | 4 studies | 19% ± 3% | |
macrophage | 4 studies | 21% ± 5% | |
glutamatergic neuron | 4 studies | 32% ± 9% | |
secretory cell | 3 studies | 30% ± 9% | |
glomerular endothelial cell | 3 studies | 34% ± 8% | |
naive B cell | 3 studies | 18% ± 2% | |
ciliated cell | 3 studies | 35% ± 4% | |
Mueller cell | 3 studies | 24% ± 6% | |
luminal hormone-sensing cell of mammary gland | 3 studies | 18% ± 3% | |
GABAergic neuron | 3 studies | 32% ± 4% | |
abnormal cell | 3 studies | 19% ± 2% | |
neuron | 3 studies | 31% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 3956.58 | 459 / 459 | 100% | 74.10 | 1118 / 1118 |
esophagus | 100% | 2901.44 | 1445 / 1445 | 100% | 48.13 | 183 / 183 |
lung | 100% | 3119.14 | 578 / 578 | 100% | 58.49 | 1155 / 1155 |
ovary | 100% | 3636.16 | 180 / 180 | 100% | 49.08 | 430 / 430 |
prostate | 100% | 2495.85 | 245 / 245 | 100% | 69.97 | 501 / 502 |
uterus | 100% | 3533.99 | 170 / 170 | 100% | 66.37 | 458 / 459 |
brain | 100% | 1899.85 | 2634 / 2642 | 100% | 63.88 | 705 / 705 |
thymus | 100% | 3894.12 | 653 / 653 | 100% | 126.18 | 603 / 605 |
kidney | 100% | 3390.52 | 89 / 89 | 100% | 85.40 | 898 / 901 |
pancreas | 99% | 1415.90 | 325 / 328 | 100% | 55.83 | 178 / 178 |
bladder | 100% | 3155.24 | 21 / 21 | 99% | 50.75 | 498 / 504 |
adrenal gland | 100% | 3076.41 | 258 / 258 | 99% | 59.79 | 227 / 230 |
stomach | 100% | 2341.84 | 359 / 359 | 98% | 39.97 | 281 / 286 |
intestine | 100% | 3083.35 | 966 / 966 | 98% | 38.86 | 516 / 527 |
liver | 99% | 1094.03 | 223 / 226 | 98% | 31.51 | 399 / 406 |
skin | 100% | 3000.95 | 1809 / 1809 | 93% | 35.29 | 440 / 472 |
adipose | 100% | 4188.40 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4705.55 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 38.19 | 29 / 29 |
spleen | 100% | 1923.05 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 52.14 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 39.87 | 1 / 1 |
muscle | 100% | 2175.32 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 2471.58 | 854 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 83% | 24.83 | 66 / 80 |
peripheral blood | 75% | 1259.04 | 697 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016020 | Cellular component | membrane |
GO_0005515 | Molecular function | protein binding |
Gene name | GINM1 |
Protein name | Glycosylated integral membrane protein 1 Glycoprotein integral membrane protein 1 |
Synonyms | UNQ710/PRO1361 C6orf72 |
Description | |
Accessions | ENST00000650599.1 ENST00000433539.1 Q5TFA5 A0A3B3IRL9 Q9NU53 ENST00000367419.10 |