GIMAP6 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	18 studies	29% ± 10%	Explore
capillary endothelial cell	12 studies	23% ± 4%	Explore
natural killer cell	12 studies	23% ± 5%	Explore
endothelial cell of artery	8 studies	22% ± 6%	Explore
CD16-negative, CD56-bright natural killer cell, human	6 studies	26% ± 10%	Explore
gamma-delta T cell	6 studies	22% ± 4%	Explore
endothelial cell of vascular tree	6 studies	28% ± 7%	Explore
vein endothelial cell	6 studies	24% ± 7%	Explore
T cell	5 studies	17% ± 2%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	5 studies	18% ± 2%	Explore
CD8-positive, alpha-beta T cell	5 studies	21% ± 7%	Explore
CD16-positive, CD56-dim natural killer cell, human	4 studies	25% ± 8%	Explore
CD4-positive, alpha-beta T cell	4 studies	23% ± 7%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	4 studies	19% ± 1%	Explore
regulatory T cell	4 studies	17% ± 0%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	19% ± 1%	Explore
mature NK T cell	3 studies	18% ± 2%	Explore
glomerular endothelial cell	3 studies	34% ± 0%	Explore
endothelial cell of lymphatic vessel	3 studies	20% ± 5%	Explore
group 3 innate lymphoid cell	3 studies	19% ± 2%	Explore
innate lymphoid cell	3 studies	21% ± 6%	Explore
mucosal invariant T cell	3 studies	18% ± 2%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	99%	2364.74	649 / 653	98%	23.99	594 / 605
breast	100%	3423.41	458 / 459	96%	19.70	1072 / 1118
lung	100%	3881.99	578 / 578	90%	15.66	1038 / 1155
kidney	99%	1451.43	88 / 89	86%	42.24	775 / 901
prostate	93%	1050.33	228 / 245	85%	9.88	429 / 502
adrenal gland	98%	1169.32	252 / 258	79%	11.76	182 / 230
bladder	100%	1437.76	21 / 21	74%	9.06	375 / 504
intestine	95%	1569.12	915 / 966	79%	9.38	414 / 527
stomach	92%	1030.77	331 / 359	80%	11.72	228 / 286
uterus	99%	2099.02	168 / 170	66%	7.11	302 / 459
esophagus	89%	1248.85	1285 / 1445	72%	7.75	132 / 183
brain	58%	433.69	1544 / 2642	99%	17.81	698 / 705
pancreas	61%	364.99	201 / 328	91%	15.16	162 / 178
skin	58%	579.87	1046 / 1809	79%	15.09	373 / 472
ovary	58%	526.63	105 / 180	68%	6.94	294 / 430
liver	34%	244.07	77 / 226	72%	7.18	293 / 406
spleen	100%	7041.10	241 / 241	0%	0	0 / 0
adipose	100%	3848.93	1201 / 1204	0%	0	0 / 0
peripheral blood	96%	3006.03	891 / 929	0%	0	0 / 0
heart	95%	1471.74	822 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	93%	41.02	27 / 29
tonsil	0%	0	0 / 0	80%	15.25	36 / 45
blood vessel	65%	821.50	873 / 1335	0%	0	0 / 0
muscle	60%	439.53	484 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	28%	2.70	22 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1