Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1295.54 | 2641 / 2642 | 99% | 3.86 | 698 / 705 |
thymus | 100% | 1252.91 | 653 / 653 | 84% | 2.01 | 508 / 605 |
ovary | 100% | 533.11 | 180 / 180 | 72% | 1.52 | 310 / 430 |
liver | 100% | 1152.00 | 226 / 226 | 62% | 1.08 | 253 / 406 |
kidney | 100% | 1029.84 | 89 / 89 | 61% | 1.08 | 550 / 901 |
prostate | 100% | 453.20 | 244 / 245 | 61% | 0.89 | 306 / 502 |
esophagus | 99% | 343.92 | 1428 / 1445 | 45% | 0.70 | 82 / 183 |
breast | 100% | 609.51 | 457 / 459 | 39% | 0.64 | 437 / 1118 |
uterus | 99% | 416.28 | 169 / 170 | 39% | 0.68 | 180 / 459 |
skin | 89% | 368.06 | 1618 / 1809 | 49% | 0.78 | 229 / 472 |
bladder | 100% | 520.14 | 21 / 21 | 36% | 0.61 | 181 / 504 |
lung | 91% | 288.10 | 528 / 578 | 41% | 0.68 | 470 / 1155 |
intestine | 97% | 346.64 | 939 / 966 | 32% | 0.48 | 171 / 527 |
stomach | 99% | 336.36 | 356 / 359 | 29% | 0.46 | 82 / 286 |
adrenal gland | 100% | 452.96 | 257 / 258 | 23% | 0.32 | 52 / 230 |
pancreas | 96% | 270.24 | 315 / 328 | 19% | 0.28 | 33 / 178 |
adipose | 100% | 632.88 | 1204 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 822.43 | 803 / 803 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.21 | 1 / 1 |
blood vessel | 99% | 406.29 | 1325 / 1335 | 0% | 0 | 0 / 0 |
heart | 94% | 476.84 | 807 / 861 | 0% | 0 | 0 / 0 |
spleen | 71% | 140.37 | 171 / 241 | 0% | 0 | 0 / 0 |
peripheral blood | 19% | 161.31 | 180 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 19% | 0.24 | 15 / 80 |
tonsil | 0% | 0 | 0 / 0 | 7% | 0.08 | 3 / 45 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006546 | Biological process | glycine catabolic process |
GO_0009249 | Biological process | protein lipoylation |
GO_0019464 | Biological process | glycine decarboxylation via glycine cleavage system |
GO_0005960 | Cellular component | glycine cleavage complex |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0005737 | Cellular component | cytoplasm |
GO_0005739 | Cellular component | mitochondrion |
GO_0004047 | Molecular function | aminomethyltransferase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | GCSH |
Protein name | Glycine cleavage system protein H Glycine cleavage system H protein, mitochondrial (Lipoic acid-containing protein) Glycine cleavage system H protein |
Synonyms | hCG_1980047 |
Description | FUNCTION: The glycine cleavage system catalyzes the degradation of glycine. The H protein (GCSH) shuttles the methylamine group of glycine from the P protein (GLDC) to the T protein (GCST). Has a pivotal role in the lipoylation of enzymes involved in cellular energetics such as the mitochondrial dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (DLAT), and the mitochondrial dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (DLST) . . FUNCTION: The H protein shuttles the methylamine group of glycine from the P protein to the T protein. . FUNCTION: The H protein shuttles the methylamine group of glycine from the P protein to the T protein. . FUNCTION: The H protein shuttles the methylamine group of glycine from the P protein to the T protein. . FUNCTION: The H protein shuttles the methylamine group of glycine from the P protein to the T protein. . |
Accessions | ENST00000639689.1 ENST00000561801.2 H3BQ30 P23434 ENST00000709349.1 ENST00000640150.1 A0A1W2PQX3 ENST00000315467.9 ENST00000566566.2 A0A1W2PNX3 H3BPF0 Q53XL7 Q6IAT2 H3BNV1 ENST00000564386.6 ENST00000564477.1 A0A1W2PQV2 ENST00000639169.1 ENST00000569885.6 H3BUH9 H3BUG8 |