Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 2474.35 | 245 / 245 | 100% | 28.30 | 502 / 502 |
kidney | 100% | 5160.89 | 89 / 89 | 100% | 75.99 | 898 / 901 |
brain | 100% | 2994.94 | 2641 / 2642 | 100% | 21.95 | 702 / 705 |
breast | 100% | 2504.04 | 459 / 459 | 99% | 19.33 | 1109 / 1118 |
thymus | 100% | 2734.28 | 653 / 653 | 99% | 25.39 | 600 / 605 |
pancreas | 100% | 2739.06 | 328 / 328 | 99% | 16.89 | 176 / 178 |
lung | 100% | 2211.89 | 578 / 578 | 99% | 20.04 | 1142 / 1155 |
ovary | 100% | 2585.66 | 180 / 180 | 99% | 12.87 | 424 / 430 |
adrenal gland | 100% | 2087.33 | 258 / 258 | 98% | 19.59 | 225 / 230 |
esophagus | 100% | 2154.02 | 1445 / 1445 | 98% | 12.04 | 179 / 183 |
skin | 100% | 2290.82 | 1809 / 1809 | 98% | 22.48 | 461 / 472 |
bladder | 100% | 2662.90 | 21 / 21 | 98% | 14.74 | 492 / 504 |
intestine | 100% | 2038.31 | 966 / 966 | 98% | 11.86 | 514 / 527 |
stomach | 100% | 1704.30 | 359 / 359 | 96% | 11.34 | 275 / 286 |
uterus | 100% | 2426.81 | 170 / 170 | 96% | 13.30 | 440 / 459 |
liver | 99% | 855.10 | 224 / 226 | 87% | 8.79 | 354 / 406 |
adipose | 100% | 2521.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2118.12 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1786.88 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.55 | 1 / 1 |
muscle | 100% | 1237.04 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 1441.85 | 844 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 14.77 | 44 / 45 |
eye | 0% | 0 | 0 / 0 | 93% | 12.58 | 74 / 80 |
peripheral blood | 66% | 512.72 | 617 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 59% | 3.76 | 17 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016266 | Biological process | O-glycan processing |
GO_0007220 | Biological process | Notch receptor processing |
GO_0060271 | Biological process | cilium assembly |
GO_0008593 | Biological process | regulation of Notch signaling pathway |
GO_0061314 | Biological process | Notch signaling involved in heart development |
GO_0007368 | Biological process | determination of left/right symmetry |
GO_0018243 | Biological process | protein O-linked glycosylation via threonine |
GO_0006493 | Biological process | protein O-linked glycosylation |
GO_0000139 | Cellular component | Golgi membrane |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005112 | Molecular function | Notch binding |
GO_0004653 | Molecular function | polypeptide N-acetylgalactosaminyltransferase activity |
GO_0030246 | Molecular function | carbohydrate binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | GALNT11 |
Protein name | Polypeptide N-acetylgalactosaminyltransferase 11 Polypeptide N-acetylgalactosaminyltransferase 11 (cDNA FLJ57736, highly similar to PolypeptideN-acetylgalactosaminyltransferase 11) Polypeptide N-acetylgalactosaminyltransferase 11 (EC 2.4.1.41) (Polypeptide GalNAc transferase 11) (GalNAc-T11) (pp-GaNTase 11) (Protein-UDP acetylgalactosaminyltransferase 11) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 11) Alternative protein GALNT11 Polypeptide N-acetylgalactosaminyltransferase (EC 2.4.1.-) (Protein-UDP acetylgalactosaminyltransferase) |
Synonyms | hCG_1990637 tcag7.1057 |
Description | FUNCTION: Polypeptide N-acetylgalactosaminyltransferase that catalyzes the initiation of protein O-linked glycosylation and is involved in left/right asymmetry by mediating O-glycosylation of NOTCH1. O-glycosylation of NOTCH1 promotes activation of NOTCH1, modulating the balance between motile and immotile (sensory) cilia at the left-right organiser (LRO). Polypeptide N-acetylgalactosaminyltransferases catalyze the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Displays the same enzyme activity toward MUC1, MUC4, and EA2 than GALNT1. Not involved in glycosylation of erythropoietin (EPO). . |
Accessions | ENST00000447778.5 ENST00000431668.1 ENST00000446096.5 ENST00000423337.5 ENST00000430044.7 [Q8NCW6-1] ENST00000431940.1 C9K0N9 ENST00000447796.1 Q8NCW6 C9J111 A0A090N7X6 C9JPR8 ENST00000434507.5 [Q8NCW6-1] C9J8A7 ENST00000422997.6 [Q8NCW6-2] H7BZL5 B7Z3L9 C9JMT8 ENST00000415421.5 [Q8NCW6-2] ENST00000419245.5 L8EB40 |