Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 26 studies | 40% ± 23% | |
endothelial cell | 24 studies | 42% ± 18% | |
astrocyte | 21 studies | 67% ± 20% | |
oligodendrocyte | 17 studies | 81% ± 18% | |
fibroblast | 17 studies | 34% ± 13% | |
microglial cell | 16 studies | 66% ± 12% | |
oligodendrocyte precursor cell | 15 studies | 56% ± 19% | |
glutamatergic neuron | 13 studies | 70% ± 20% | |
GABAergic neuron | 11 studies | 59% ± 21% | |
adipocyte | 10 studies | 53% ± 17% | |
myeloid cell | 9 studies | 42% ± 19% | |
smooth muscle cell | 8 studies | 36% ± 17% | |
neuron | 8 studies | 54% ± 23% | |
mast cell | 7 studies | 30% ± 9% | |
endothelial cell of lymphatic vessel | 7 studies | 40% ± 10% | |
epithelial cell | 6 studies | 38% ± 19% | |
interneuron | 6 studies | 63% ± 18% | |
dendritic cell | 6 studies | 39% ± 8% | |
ciliated cell | 6 studies | 28% ± 12% | |
pericyte | 5 studies | 30% ± 16% | |
alveolar macrophage | 5 studies | 58% ± 32% | |
basal cell | 5 studies | 41% ± 15% | |
type I pneumocyte | 5 studies | 49% ± 10% | |
type II pneumocyte | 5 studies | 46% ± 8% | |
granule cell | 4 studies | 68% ± 7% | |
retinal pigment epithelial cell | 4 studies | 39% ± 17% | |
non-classical monocyte | 4 studies | 28% ± 10% | |
endothelial cell of vascular tree | 4 studies | 28% ± 11% | |
capillary endothelial cell | 4 studies | 43% ± 22% | |
club cell | 4 studies | 37% ± 14% | |
monocyte | 4 studies | 49% ± 20% | |
endothelial cell of sinusoid | 3 studies | 29% ± 7% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 77% ± 6% | |
GABAergic interneuron | 3 studies | 60% ± 4% | |
glial cell | 3 studies | 51% ± 18% | |
progenitor cell | 3 studies | 50% ± 22% | |
mononuclear phagocyte | 3 studies | 38% ± 18% | |
vein endothelial cell | 3 studies | 41% ± 18% | |
GABAergic amacrine cell | 3 studies | 36% ± 13% | |
glycinergic amacrine cell | 3 studies | 28% ± 14% | |
rod bipolar cell | 3 studies | 52% ± 23% | |
cholangiocyte | 3 studies | 38% ± 27% | |
amacrine cell | 3 studies | 47% ± 21% | |
abnormal cell | 3 studies | 34% ± 17% | |
neural progenitor cell | 3 studies | 36% ± 14% | |
ependymal cell | 3 studies | 73% ± 7% | |
chondrocyte | 3 studies | 30% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 13136.62 | 2642 / 2642 | 100% | 110.61 | 703 / 705 |
kidney | 100% | 4061.28 | 89 / 89 | 97% | 35.49 | 877 / 901 |
ovary | 100% | 9794.39 | 180 / 180 | 97% | 23.98 | 416 / 430 |
lung | 100% | 7292.18 | 577 / 578 | 97% | 30.01 | 1118 / 1155 |
thymus | 100% | 8525.51 | 652 / 653 | 94% | 45.81 | 567 / 605 |
stomach | 99% | 3112.33 | 354 / 359 | 92% | 22.35 | 262 / 286 |
intestine | 99% | 3213.07 | 952 / 966 | 90% | 19.20 | 476 / 527 |
esophagus | 87% | 2725.44 | 1254 / 1445 | 98% | 35.55 | 180 / 183 |
uterus | 100% | 4388.49 | 170 / 170 | 84% | 21.02 | 386 / 459 |
prostate | 100% | 3617.11 | 244 / 245 | 83% | 15.13 | 417 / 502 |
pancreas | 88% | 2252.07 | 287 / 328 | 92% | 18.54 | 164 / 178 |
skin | 89% | 2969.62 | 1614 / 1809 | 87% | 43.86 | 410 / 472 |
adrenal gland | 100% | 5469.01 | 258 / 258 | 75% | 12.86 | 172 / 230 |
breast | 100% | 4916.94 | 458 / 459 | 75% | 16.00 | 838 / 1118 |
bladder | 100% | 4496.43 | 21 / 21 | 71% | 16.64 | 360 / 504 |
adipose | 100% | 5821.98 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4781.71 | 1331 / 1335 | 0% | 0 | 0 / 0 |
spleen | 99% | 3799.86 | 238 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 49.81 | 76 / 80 |
muscle | 92% | 3230.74 | 739 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 84% | 18.19 | 38 / 45 |
lymph node | 0% | 0 | 0 / 0 | 66% | 12.76 | 19 / 29 |
heart | 59% | 1207.25 | 506 / 861 | 0% | 0 | 0 / 0 |
liver | 8% | 154.26 | 18 / 226 | 25% | 6.62 | 100 / 406 |
peripheral blood | 7% | 132.89 | 61 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0022604 | Biological process | regulation of cell morphogenesis |
GO_0008360 | Biological process | regulation of cell shape |
GO_0007010 | Biological process | cytoskeleton organization |
GO_0030866 | Biological process | cortical actin cytoskeleton organization |
GO_0016477 | Biological process | cell migration |
GO_0005829 | Cellular component | cytosol |
GO_0045296 | Molecular function | cadherin binding |
GO_0051015 | Molecular function | actin filament binding |
GO_0031267 | Molecular function | small GTPase binding |
Gene name | FMNL2 |
Protein name | FMNL2 protein Formin-like protein 2 (Formin homology 2 domain-containing protein 2) Formin like 2 |
Synonyms | FHOD2 KIAA1902 |
Description | FUNCTION: Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the cortical actin filament dynamics. . |
Accessions | Q96PY5 C9IZY8 Q96CE5 ENST00000288670.14 [Q96PY5-3] ENST00000475377.3 |