Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 18 studies | 47% ± 26% | |
microglial cell | 14 studies | 48% ± 14% | |
myeloid cell | 10 studies | 47% ± 23% | |
ciliated cell | 9 studies | 29% ± 15% | |
glutamatergic neuron | 9 studies | 62% ± 27% | |
GABAergic neuron | 8 studies | 48% ± 24% | |
mast cell | 8 studies | 36% ± 15% | |
retinal cone cell | 7 studies | 73% ± 26% | |
oligodendrocyte | 6 studies | 30% ± 16% | |
epithelial cell | 6 studies | 30% ± 10% | |
monocyte | 5 studies | 36% ± 14% | |
retinal bipolar neuron | 5 studies | 57% ± 32% | |
dendritic cell | 5 studies | 40% ± 6% | |
retinal rod cell | 5 studies | 63% ± 28% | |
type I pneumocyte | 5 studies | 27% ± 3% | |
type II pneumocyte | 5 studies | 46% ± 11% | |
OFF-bipolar cell | 4 studies | 60% ± 29% | |
ON-bipolar cell | 4 studies | 61% ± 33% | |
retina horizontal cell | 4 studies | 32% ± 13% | |
melanocyte | 4 studies | 58% ± 35% | |
neuron | 3 studies | 37% ± 13% | |
retinal ganglion cell | 3 studies | 66% ± 19% | |
rod bipolar cell | 3 studies | 82% ± 21% | |
alveolar macrophage | 3 studies | 56% ± 5% | |
goblet cell | 3 studies | 34% ± 13% | |
interneuron | 3 studies | 75% ± 7% | |
mucus secreting cell | 3 studies | 33% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
skin | 100% | 1572.29 | 1806 / 1809 | 99% | 53.92 | 468 / 472 |
stomach | 97% | 996.92 | 350 / 359 | 95% | 5.38 | 272 / 286 |
intestine | 95% | 1095.21 | 914 / 966 | 95% | 4.61 | 501 / 527 |
breast | 96% | 841.61 | 441 / 459 | 91% | 5.55 | 1016 / 1118 |
thymus | 100% | 867.69 | 652 / 653 | 86% | 3.04 | 521 / 605 |
kidney | 100% | 708.25 | 89 / 89 | 78% | 3.25 | 706 / 901 |
lung | 97% | 1408.37 | 561 / 578 | 77% | 3.43 | 888 / 1155 |
esophagus | 89% | 488.59 | 1279 / 1445 | 84% | 4.05 | 153 / 183 |
prostate | 96% | 613.04 | 234 / 245 | 72% | 2.47 | 362 / 502 |
pancreas | 73% | 269.02 | 239 / 328 | 91% | 4.43 | 162 / 178 |
bladder | 86% | 445.86 | 18 / 21 | 48% | 1.83 | 244 / 504 |
uterus | 56% | 234.25 | 95 / 170 | 60% | 1.90 | 277 / 459 |
adrenal gland | 78% | 334.78 | 202 / 258 | 23% | 0.66 | 53 / 230 |
adipose | 96% | 801.43 | 1155 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 93% | 18.78 | 74 / 80 |
brain | 47% | 429.91 | 1246 / 2642 | 35% | 0.75 | 247 / 705 |
spleen | 79% | 516.40 | 190 / 241 | 0% | 0 | 0 / 0 |
ovary | 16% | 47.49 | 28 / 180 | 58% | 1.41 | 249 / 430 |
blood vessel | 66% | 344.82 | 879 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 56% | 1.03 | 25 / 45 |
peripheral blood | 52% | 304.87 | 482 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 41% | 0.92 | 12 / 29 |
muscle | 41% | 198.91 | 331 / 803 | 0% | 0 | 0 / 0 |
heart | 40% | 150.32 | 345 / 861 | 0% | 0 | 0 / 0 |
liver | 7% | 27.92 | 15 / 226 | 12% | 0.32 | 48 / 406 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010467 | Biological process | gene expression |
GO_0030838 | Biological process | positive regulation of actin filament polymerization |
GO_0072092 | Biological process | ureteric bud invasion |
GO_0051127 | Biological process | positive regulation of actin nucleation |
GO_0045010 | Biological process | actin nucleation |
GO_0035137 | Biological process | hindlimb morphogenesis |
GO_0051894 | Biological process | positive regulation of focal adhesion assembly |
GO_0035136 | Biological process | forelimb morphogenesis |
GO_0048705 | Biological process | skeletal system morphogenesis |
GO_0005884 | Cellular component | actin filament |
GO_0005737 | Cellular component | cytoplasm |
GO_0005912 | Cellular component | adherens junction |
GO_0005886 | Cellular component | plasma membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0005634 | Cellular component | nucleus |
GO_0003779 | Molecular function | actin binding |
GO_0008017 | Molecular function | microtubule binding |
GO_0017124 | Molecular function | SH3 domain binding |
Gene name | FMN1 |
Protein name | Formin 1 Formin-1 (Limb deformity protein homolog) Alternative protein FMN1 |
Synonyms | FMN LD |
Description | FUNCTION: Plays a role in the formation of adherens junction and the polymerization of linear actin cables. . |
Accessions | Q68DA7 ENST00000334528.13 [Q68DA7-5] ENST00000616417.5 [Q68DA7-1] H0YL93 ENST00000559610.1 ENST00000558197.1 [Q68DA7-3] L8EC76 ENST00000320930.7 [Q68DA7-2] A0A5F9ZHS8 ENST00000672206.1 ENST00000560317.5 H0YMP0 H0YM30 H0YLM7 ENST00000558711.1 ENST00000561249.5 |