Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 46 studies | 65% ± 22% | |
connective tissue cell | 17 studies | 63% ± 22% | |
myofibroblast cell | 13 studies | 49% ± 25% | |
smooth muscle cell | 13 studies | 29% ± 11% | |
pericyte | 12 studies | 25% ± 9% | |
epithelial cell | 9 studies | 47% ± 22% | |
basal cell | 7 studies | 27% ± 8% | |
endothelial cell | 6 studies | 27% ± 8% | |
progenitor cell | 5 studies | 32% ± 13% | |
adventitial cell | 5 studies | 88% ± 13% | |
astrocyte | 5 studies | 25% ± 7% | |
extravillous trophoblast | 3 studies | 84% ± 11% | |
placental villous trophoblast | 3 studies | 93% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 100% | 62282.12 | 170 / 170 | 94% | 232.24 | 433 / 459 |
prostate | 100% | 59575.69 | 244 / 245 | 95% | 130.65 | 475 / 502 |
breast | 96% | 42643.58 | 441 / 459 | 91% | 116.84 | 1022 / 1118 |
lung | 100% | 53557.23 | 576 / 578 | 87% | 103.82 | 1006 / 1155 |
bladder | 100% | 88248.52 | 21 / 21 | 84% | 258.82 | 423 / 504 |
ovary | 97% | 25541.03 | 174 / 180 | 79% | 77.73 | 339 / 430 |
esophagus | 97% | 37103.20 | 1405 / 1445 | 66% | 58.83 | 121 / 183 |
skin | 97% | 63151.46 | 1761 / 1809 | 56% | 42.19 | 262 / 472 |
intestine | 92% | 23417.66 | 887 / 966 | 58% | 52.62 | 304 / 527 |
stomach | 79% | 27078.25 | 282 / 359 | 64% | 69.07 | 182 / 286 |
thymus | 93% | 27178.70 | 608 / 653 | 36% | 38.11 | 220 / 605 |
pancreas | 26% | 2791.04 | 84 / 328 | 93% | 193.64 | 165 / 178 |
ureter | 0% | 0 | 0 / 0 | 100% | 214.49 | 1 / 1 |
tonsil | 0% | 0 | 0 / 0 | 98% | 125.75 | 44 / 45 |
blood vessel | 98% | 52855.23 | 1302 / 1335 | 0% | 0 | 0 / 0 |
adipose | 96% | 36609.61 | 1161 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 82% | 14444.23 | 212 / 258 | 14% | 9.95 | 32 / 230 |
heart | 74% | 39622.95 | 636 / 861 | 0% | 0 | 0 / 0 |
kidney | 37% | 5697.17 | 33 / 89 | 16% | 10.83 | 147 / 901 |
liver | 1% | 93.44 | 2 / 226 | 22% | 18.95 | 89 / 406 |
brain | 1% | 61.99 | 18 / 2642 | 21% | 16.24 | 150 / 705 |
lymph node | 0% | 0 | 0 / 0 | 21% | 7.75 | 6 / 29 |
eye | 0% | 0 | 0 / 0 | 11% | 4.57 | 9 / 80 |
spleen | 11% | 1715.52 | 27 / 241 | 0% | 0 | 0 / 0 |
muscle | 6% | 741.89 | 48 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0072378 | Biological process | blood coagulation, fibrin clot formation |
GO_0070373 | Biological process | negative regulation of ERK1 and ERK2 cascade |
GO_0007162 | Biological process | negative regulation of cell adhesion |
GO_0030198 | Biological process | extracellular matrix organization |
GO_2000647 | Biological process | negative regulation of stem cell proliferation |
GO_0001933 | Biological process | negative regulation of protein phosphorylation |
GO_0007229 | Biological process | integrin-mediated signaling pathway |
GO_1900025 | Biological process | negative regulation of substrate adhesion-dependent cell spreading |
GO_2000146 | Biological process | negative regulation of cell motility |
GO_0007566 | Biological process | embryo implantation |
GO_0005615 | Cellular component | extracellular space |
GO_0071953 | Cellular component | elastic fiber |
GO_0005576 | Cellular component | extracellular region |
GO_0070062 | Cellular component | extracellular exosome |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0031012 | Cellular component | extracellular matrix |
GO_0005604 | Cellular component | basement membrane |
GO_0070051 | Molecular function | fibrinogen binding |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0005201 | Molecular function | extracellular matrix structural constituent |
GO_0042802 | Molecular function | identical protein binding |
GO_0001968 | Molecular function | fibronectin binding |
GO_0016504 | Molecular function | peptidase activator activity |
GO_0005178 | Molecular function | integrin binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | FBLN1 |
Protein name | Fibulin-1 (FIBL-1) Fibulin-1 Fibulin 1 |
Synonyms | PP213 |
Description | FUNCTION: Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. Has been implicated in a role in cellular transformation and tumor invasion, it appears to be a tumor suppressor. May play a role in haemostasis and thrombosis owing to its ability to bind fibrinogen and incorporate into clots. Could play a significant role in modulating the neurotrophic activities of APP, particularly soluble APP. . FUNCTION: Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. . FUNCTION: Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. . FUNCTION: Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. . |
Accessions | ENST00000327858.11 [P23142-1] A0A0U1RRA4 ENST00000439835.1 ENST00000437711.1 ENST00000442170.6 [P23142-3] H7C1M6 B1AHM7 A0A8S0LWY1 ENST00000262722.11 [P23142-4] ENST00000451475.5 ENST00000445110.5 ENST00000455233.5 P23142 ENST00000402984.7 B1AHM8 B1AHN3 A0A8S0MAG0 ENST00000340923.9 [P23142-2] B1AHM6 ENST00000454279.5 B1AHL2 B1AHM5 ENST00000460300.2 ENST00000411478.5 B1AHM9 |