Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 15 studies | 28% ± 9% | |
astrocyte | 11 studies | 30% ± 12% | |
oligodendrocyte precursor cell | 10 studies | 31% ± 11% | |
mast cell | 10 studies | 26% ± 8% | |
oligodendrocyte | 10 studies | 29% ± 8% | |
adipocyte | 9 studies | 31% ± 9% | |
glutamatergic neuron | 8 studies | 47% ± 25% | |
macrophage | 7 studies | 24% ± 5% | |
GABAergic neuron | 7 studies | 47% ± 23% | |
interneuron | 6 studies | 40% ± 22% | |
microglial cell | 6 studies | 24% ± 6% | |
epithelial cell | 6 studies | 31% ± 16% | |
endothelial cell of lymphatic vessel | 6 studies | 31% ± 8% | |
neuron | 5 studies | 39% ± 16% | |
granule cell | 4 studies | 23% ± 5% | |
retinal pigment epithelial cell | 4 studies | 32% ± 11% | |
ciliated cell | 4 studies | 21% ± 4% | |
retinal cone cell | 4 studies | 23% ± 2% | |
type I pneumocyte | 4 studies | 19% ± 3% | |
GABAergic interneuron | 3 studies | 26% ± 6% | |
T cell | 3 studies | 17% ± 1% | |
alveolar macrophage | 3 studies | 29% ± 8% | |
monocyte | 3 studies | 23% ± 7% | |
type II pneumocyte | 3 studies | 19% ± 3% | |
lymphocyte | 3 studies | 27% ± 4% | |
cardiac muscle cell | 3 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2044.49 | 1445 / 1445 | 100% | 42.75 | 183 / 183 |
skin | 100% | 1338.25 | 1808 / 1809 | 100% | 40.87 | 472 / 472 |
prostate | 100% | 1730.39 | 245 / 245 | 100% | 26.78 | 501 / 502 |
intestine | 100% | 1757.31 | 966 / 966 | 100% | 27.82 | 525 / 527 |
ovary | 100% | 1316.41 | 180 / 180 | 100% | 24.76 | 428 / 430 |
brain | 100% | 1463.43 | 2632 / 2642 | 100% | 21.36 | 703 / 705 |
stomach | 100% | 1198.52 | 359 / 359 | 99% | 31.44 | 284 / 286 |
thymus | 100% | 1526.71 | 653 / 653 | 99% | 22.13 | 600 / 605 |
breast | 100% | 1531.01 | 459 / 459 | 99% | 31.44 | 1108 / 1118 |
lung | 100% | 1436.56 | 578 / 578 | 99% | 26.17 | 1142 / 1155 |
bladder | 100% | 1796.43 | 21 / 21 | 99% | 25.04 | 498 / 504 |
uterus | 100% | 1306.66 | 170 / 170 | 99% | 19.98 | 453 / 459 |
pancreas | 99% | 807.99 | 324 / 328 | 99% | 27.20 | 177 / 178 |
kidney | 100% | 1697.13 | 89 / 89 | 96% | 23.25 | 864 / 901 |
adrenal gland | 100% | 1080.90 | 258 / 258 | 96% | 14.56 | 220 / 230 |
liver | 100% | 708.72 | 226 / 226 | 90% | 13.33 | 364 / 406 |
adipose | 100% | 1441.54 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 31.07 | 80 / 80 |
muscle | 100% | 4101.94 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1169.25 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.02 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 23.15 | 1 / 1 |
blood vessel | 100% | 1526.25 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 1177.78 | 840 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 15.12 | 28 / 29 |
peripheral blood | 87% | 653.32 | 811 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005515 | Molecular function | protein binding |
Gene name | FAM222B |
Protein name | Family with sequence similarity 222 member B Protein FAM222B |
Synonyms | C17orf63 |
Description | |
Accessions | ENST00000579381.1 ENST00000583953.6 ENST00000583522.6 ENST00000584059.1 ENST00000581229 ENST00000581407.6 ENST00000577376.6 ENST00000581229.6 ENST00000582059.6 J3QKY8 ENST00000577513 ENST00000577513.6 J3QRR9 ENST00000583307 ENST00000583307.6 ENST00000341217.7 J3QRM5 ENST00000452648.8 ENST00000577376 J3QR32 Q8WU58 J3QLP2 J3KSK8 ENST00000582266.6 ENST00000577682.6 |