Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 12 studies | 42% ± 23% | |
oligodendrocyte | 11 studies | 27% ± 9% | |
mast cell | 10 studies | 35% ± 18% | |
GABAergic neuron | 8 studies | 49% ± 19% | |
ciliated cell | 7 studies | 23% ± 5% | |
astrocyte | 7 studies | 33% ± 13% | |
neuron | 6 studies | 37% ± 8% | |
interneuron | 6 studies | 45% ± 23% | |
oligodendrocyte precursor cell | 6 studies | 25% ± 8% | |
basal cell | 6 studies | 28% ± 16% | |
retinal cone cell | 6 studies | 37% ± 9% | |
endothelial cell | 5 studies | 39% ± 16% | |
adipocyte | 5 studies | 20% ± 5% | |
respiratory goblet cell | 4 studies | 23% ± 4% | |
granule cell | 4 studies | 24% ± 5% | |
macrophage | 4 studies | 35% ± 13% | |
retinal ganglion cell | 4 studies | 72% ± 16% | |
epithelial cell | 4 studies | 35% ± 20% | |
type II pneumocyte | 4 studies | 18% ± 2% | |
secretory cell | 3 studies | 23% ± 4% | |
GABAergic interneuron | 3 studies | 41% ± 11% | |
pericyte | 3 studies | 32% ± 18% | |
myeloid cell | 3 studies | 27% ± 15% | |
alveolar macrophage | 3 studies | 21% ± 5% | |
kidney loop of Henle epithelial cell | 3 studies | 28% ± 7% | |
renal principal cell | 3 studies | 28% ± 6% | |
mucus secreting cell | 3 studies | 28% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 14 studies | 35% ± 19% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 20075.79 | 2641 / 2642 | 100% | 49.12 | 703 / 705 |
ovary | 99% | 4094.77 | 179 / 180 | 100% | 35.77 | 429 / 430 |
kidney | 100% | 7268.53 | 89 / 89 | 99% | 53.25 | 890 / 901 |
adrenal gland | 100% | 18094.49 | 258 / 258 | 99% | 95.35 | 227 / 230 |
stomach | 99% | 4843.36 | 356 / 359 | 98% | 41.16 | 280 / 286 |
breast | 96% | 4376.87 | 439 / 459 | 98% | 36.88 | 1099 / 1118 |
uterus | 98% | 3971.44 | 166 / 170 | 95% | 31.16 | 438 / 459 |
prostate | 95% | 3504.89 | 233 / 245 | 97% | 17.62 | 487 / 502 |
esophagus | 95% | 4587.22 | 1375 / 1445 | 95% | 40.29 | 173 / 183 |
intestine | 90% | 3276.72 | 868 / 966 | 98% | 34.40 | 515 / 527 |
lung | 92% | 2978.37 | 532 / 578 | 95% | 27.64 | 1100 / 1155 |
thymus | 93% | 2945.52 | 605 / 653 | 91% | 25.53 | 552 / 605 |
bladder | 86% | 4518.67 | 18 / 21 | 93% | 35.24 | 470 / 504 |
pancreas | 58% | 1388.62 | 189 / 328 | 98% | 45.90 | 174 / 178 |
skin | 70% | 1782.07 | 1275 / 1809 | 61% | 11.78 | 288 / 472 |
ureter | 0% | 0 | 0 / 0 | 100% | 25.79 | 1 / 1 |
adipose | 97% | 4789.60 | 1170 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 96% | 4357.62 | 1275 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 25.63 | 41 / 45 |
eye | 0% | 0 | 0 / 0 | 85% | 14.44 | 68 / 80 |
heart | 57% | 1393.92 | 488 / 861 | 0% | 0 | 0 / 0 |
liver | 5% | 124.74 | 11 / 226 | 40% | 15.15 | 164 / 406 |
spleen | 10% | 235.54 | 25 / 241 | 0% | 0 | 0 / 0 |
muscle | 5% | 85.32 | 37 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0030866 | Biological process | cortical actin cytoskeleton organization |
GO_0031032 | Biological process | actomyosin structure organization |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
GO_0005198 | Molecular function | structural molecule activity |
Gene name | EPB41L1 |
Protein name | Alternative protein EPB41L1 Erythrocyte membrane protein band 4.1 like 1 Band 4.1-like protein 1 (Erythrocyte membrane protein band 4.1-like 1) (Neuronal protein 4.1) (4.1N) EPB41L1 protein |
Synonyms | KIAA0338 |
Description | FUNCTION: May function to confer stability and plasticity to neuronal membrane via multiple interactions, including the spectrin-actin-based cytoskeleton, integral membrane channels and membrane-associated guanylate kinases. |
Accessions | Q4VXN6 ENST00000430276.5 Q4VXN1 ENST00000373950.6 [Q9H4G0-3] ENST00000373945.5 A0A1B0GTW6 A0A0C4DH22 Q9H4G0 ENST00000202028.9 [Q9H4G0-2] ENST00000452261.5 ENST00000441639.5 [Q9H4G0-2] ENST00000406771.6 L8E750 ENST00000338074.7 [Q9H4G0-1] ENST00000636016.2 ENST00000432589.5 X6RC15 H0Y482 Q4VXN0 Q4VXN5 ENST00000628415.2 [Q9H4G0-4] Q4VXN8 ENST00000373946.7 ENST00000454226.5 ENST00000373941.5 ENST00000432603.1 ENST00000451082.5 ENST00000447825.5 Q4VXN2 Q4VXN7 H7C2K6 Q29RW3 ENST00000427533.2 |