Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 35 studies | 32% ± 12% | |
vein endothelial cell | 12 studies | 34% ± 8% | |
macrophage | 11 studies | 25% ± 7% | |
endothelial cell of vascular tree | 11 studies | 31% ± 10% | |
capillary endothelial cell | 8 studies | 39% ± 14% | |
epithelial cell | 7 studies | 31% ± 19% | |
basal cell | 7 studies | 23% ± 9% | |
endothelial cell of artery | 6 studies | 25% ± 11% | |
myeloid cell | 6 studies | 22% ± 6% | |
classical monocyte | 5 studies | 24% ± 9% | |
ciliated cell | 5 studies | 28% ± 12% | |
monocyte | 4 studies | 22% ± 4% | |
conventional dendritic cell | 4 studies | 25% ± 11% | |
endothelial cell of lymphatic vessel | 3 studies | 23% ± 5% | |
non-classical monocyte | 3 studies | 28% ± 9% | |
oligodendrocyte precursor cell | 3 studies | 22% ± 7% | |
dendritic cell | 3 studies | 36% ± 7% | |
club cell | 3 studies | 25% ± 6% | |
secretory cell | 3 studies | 44% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 5171.76 | 459 / 459 | 100% | 29.31 | 1116 / 1118 |
esophagus | 100% | 2786.95 | 1441 / 1445 | 100% | 29.74 | 183 / 183 |
lung | 100% | 4137.05 | 577 / 578 | 100% | 24.61 | 1153 / 1155 |
skin | 100% | 4151.05 | 1808 / 1809 | 100% | 38.76 | 470 / 472 |
bladder | 100% | 3057.86 | 21 / 21 | 99% | 32.58 | 501 / 504 |
stomach | 100% | 2325.99 | 358 / 359 | 100% | 27.12 | 285 / 286 |
pancreas | 100% | 2327.12 | 327 / 328 | 99% | 29.92 | 177 / 178 |
uterus | 100% | 3303.35 | 170 / 170 | 99% | 25.07 | 455 / 459 |
intestine | 100% | 2931.54 | 963 / 966 | 99% | 28.66 | 524 / 527 |
thymus | 100% | 5960.67 | 653 / 653 | 98% | 26.64 | 595 / 605 |
kidney | 100% | 3528.90 | 89 / 89 | 98% | 27.27 | 884 / 901 |
prostate | 100% | 2991.07 | 245 / 245 | 98% | 15.92 | 490 / 502 |
ovary | 92% | 1632.43 | 166 / 180 | 100% | 21.93 | 429 / 430 |
adrenal gland | 93% | 1280.05 | 240 / 258 | 84% | 11.21 | 193 / 230 |
liver | 77% | 1434.19 | 173 / 226 | 95% | 14.69 | 386 / 406 |
brain | 45% | 658.20 | 1180 / 2642 | 73% | 9.53 | 517 / 705 |
adipose | 100% | 6110.04 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 28.43 | 29 / 29 |
spleen | 100% | 2182.27 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 23.70 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 22.90 | 1 / 1 |
blood vessel | 100% | 3529.14 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 4288.20 | 852 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 26.25 | 79 / 80 |
peripheral blood | 76% | 2754.12 | 707 / 929 | 0% | 0 | 0 / 0 |
muscle | 53% | 562.07 | 424 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0051260 | Biological process | protein homooligomerization |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_0006897 | Biological process | endocytosis |
GO_0071363 | Biological process | cellular response to growth factor stimulus |
GO_0032456 | Biological process | endocytic recycling |
GO_0006907 | Biological process | pinocytosis |
GO_0050731 | Biological process | positive regulation of peptidyl-tyrosine phosphorylation |
GO_0030100 | Biological process | regulation of endocytosis |
GO_0005886 | Cellular component | plasma membrane |
GO_0030139 | Cellular component | endocytic vesicle |
GO_0016020 | Cellular component | membrane |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005769 | Cellular component | early endosome |
GO_0031901 | Cellular component | early endosome membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0055038 | Cellular component | recycling endosome membrane |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0003676 | Molecular function | nucleic acid binding |
GO_0045296 | Molecular function | cadherin binding |
GO_0005525 | Molecular function | GTP binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | EHD4 |
Protein name | EH domain-containing protein 4 (Hepatocellular carcinoma-associated protein 10/11) (PAST homolog 4) |
Synonyms | HCA11 HCA10 PAST4 FKSG7 |
Description | FUNCTION: ATP- and membrane-binding protein that probably controls membrane reorganization/tubulation upon ATP hydrolysis. Plays a role in early endosomal transport. . |
Accessions | ENST00000220325.9 Q9H223 |