Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 20 studies | 41% ± 16% | |
astrocyte | 19 studies | 49% ± 19% | |
fibroblast | 15 studies | 42% ± 18% | |
oligodendrocyte precursor cell | 14 studies | 50% ± 17% | |
glutamatergic neuron | 13 studies | 63% ± 23% | |
microglial cell | 13 studies | 33% ± 19% | |
GABAergic neuron | 11 studies | 63% ± 22% | |
adipocyte | 10 studies | 70% ± 16% | |
oligodendrocyte | 10 studies | 32% ± 13% | |
smooth muscle cell | 10 studies | 34% ± 15% | |
neuron | 8 studies | 48% ± 24% | |
epithelial cell | 8 studies | 37% ± 20% | |
interneuron | 7 studies | 65% ± 24% | |
pericyte | 7 studies | 36% ± 16% | |
basal cell | 7 studies | 40% ± 23% | |
macrophage | 6 studies | 38% ± 16% | |
retinal ganglion cell | 6 studies | 41% ± 23% | |
endothelial cell of lymphatic vessel | 6 studies | 41% ± 8% | |
amacrine cell | 5 studies | 39% ± 14% | |
mesothelial cell | 5 studies | 39% ± 22% | |
connective tissue cell | 5 studies | 29% ± 13% | |
type I pneumocyte | 5 studies | 51% ± 8% | |
type II pneumocyte | 5 studies | 32% ± 6% | |
cholangiocyte | 4 studies | 56% ± 22% | |
hepatocyte | 4 studies | 70% ± 26% | |
granule cell | 4 studies | 61% ± 11% | |
retinal bipolar neuron | 4 studies | 35% ± 18% | |
cardiac muscle cell | 4 studies | 21% ± 2% | |
Mueller cell | 4 studies | 43% ± 11% | |
retina horizontal cell | 4 studies | 40% ± 10% | |
club cell | 4 studies | 31% ± 9% | |
hepatic stellate cell | 3 studies | 54% ± 19% | |
GABAergic interneuron | 3 studies | 68% ± 1% | |
glial cell | 3 studies | 49% ± 24% | |
progenitor cell | 3 studies | 43% ± 6% | |
vein endothelial cell | 3 studies | 29% ± 11% | |
GABAergic amacrine cell | 3 studies | 50% ± 14% | |
OFF-bipolar cell | 3 studies | 47% ± 21% | |
glycinergic amacrine cell | 3 studies | 39% ± 11% | |
retinal rod cell | 3 studies | 30% ± 9% | |
endothelial cell of vascular tree | 3 studies | 36% ± 11% | |
retinal pigment epithelial cell | 3 studies | 38% ± 23% | |
abnormal cell | 3 studies | 39% ± 26% | |
neural progenitor cell | 3 studies | 36% ± 14% | |
ependymal cell | 3 studies | 53% ± 18% | |
megakaryocyte-erythroid progenitor cell | 3 studies | 17% ± 1% | |
myofibroblast cell | 3 studies | 34% ± 11% | |
T cell | 3 studies | 28% ± 5% | |
capillary endothelial cell | 3 studies | 20% ± 1% | |
ciliated cell | 3 studies | 26% ± 6% | |
monocyte | 3 studies | 24% ± 3% | |
respiratory goblet cell | 3 studies | 37% ± 11% | |
Schwann cell | 3 studies | 69% ± 25% | |
transit amplifying cell | 3 studies | 43% ± 33% | |
mucus secreting cell | 3 studies | 40% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4583.46 | 1445 / 1445 | 100% | 27.46 | 183 / 183 |
brain | 99% | 3394.44 | 2627 / 2642 | 100% | 23.30 | 703 / 705 |
ovary | 100% | 5364.87 | 180 / 180 | 99% | 9.34 | 426 / 430 |
prostate | 100% | 2518.97 | 244 / 245 | 99% | 14.49 | 496 / 502 |
breast | 100% | 3420.78 | 459 / 459 | 98% | 14.21 | 1100 / 1118 |
uterus | 100% | 4817.69 | 170 / 170 | 98% | 16.46 | 449 / 459 |
skin | 100% | 3604.23 | 1801 / 1809 | 98% | 28.95 | 462 / 472 |
liver | 100% | 2453.14 | 226 / 226 | 97% | 13.28 | 392 / 406 |
lung | 97% | 1693.13 | 560 / 578 | 100% | 17.82 | 1151 / 1155 |
thymus | 100% | 2195.86 | 651 / 653 | 97% | 14.40 | 585 / 605 |
intestine | 99% | 4877.87 | 957 / 966 | 97% | 11.56 | 510 / 527 |
bladder | 100% | 3030.10 | 21 / 21 | 95% | 11.61 | 480 / 504 |
adrenal gland | 99% | 2246.91 | 256 / 258 | 93% | 13.12 | 215 / 230 |
kidney | 100% | 1649.99 | 89 / 89 | 91% | 16.63 | 822 / 901 |
stomach | 90% | 2552.45 | 323 / 359 | 97% | 13.00 | 276 / 286 |
pancreas | 83% | 965.82 | 273 / 328 | 99% | 18.49 | 176 / 178 |
adipose | 100% | 4261.78 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2527.17 | 1330 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 14.12 | 42 / 45 |
eye | 0% | 0 | 0 / 0 | 83% | 7.38 | 66 / 80 |
heart | 78% | 1144.60 | 673 / 861 | 0% | 0 | 0 / 0 |
muscle | 74% | 840.37 | 597 / 803 | 0% | 0 | 0 / 0 |
spleen | 69% | 708.05 | 167 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 59% | 3.60 | 17 / 29 |
peripheral blood | 19% | 510.84 | 179 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0015031 | Biological process | protein transport |
GO_0006897 | Biological process | endocytosis |
GO_0005768 | Cellular component | endosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
Gene name | EHBP1 |
Protein name | EH domain binding protein 1 EH domain binding protein 1, isoform CRA_a (Testis tissue sperm-binding protein Li 50e) EH domain-binding protein 1 |
Synonyms | hCG_2039624 KIAA0903 NACSIN |
Description | FUNCTION: May play a role in actin reorganization. Links clathrin-mediated endocytosis to the actin cytoskeleton. May act as Rab effector protein and play a role in vesicle trafficking . Required for perinuclear sorting and insulin-regulated recycling of SLC2A4/GLUT4 in adipocytes (By similarity). . |
Accessions | H7C1E6 ENST00000422032.1 ENST00000263991.9 [Q8NDI1-1] ENST00000454124.1 H7BZ98 ENST00000405289.5 [Q8NDI1-2] C9IYU2 H7C0Q4 ENST00000413434.5 ENST00000449820.5 ENST00000405015.7 [Q8NDI1-3] ENST00000427809.5 C9J268 ENST00000431489.6 [Q8NDI1-3] C9K0H9 ENST00000444311.1 A0A140VK17 C9JEP1 ENST00000405482.5 ENST00000426940.5 Q8NDI1 B5MC86 |