Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 19 studies | 47% ± 17% | |
astrocyte | 13 studies | 33% ± 15% | |
endothelial cell | 12 studies | 27% ± 9% | |
oligodendrocyte precursor cell | 9 studies | 27% ± 12% | |
fibroblast | 9 studies | 25% ± 8% | |
oligodendrocyte | 9 studies | 30% ± 10% | |
glutamatergic neuron | 8 studies | 37% ± 23% | |
adipocyte | 7 studies | 29% ± 4% | |
GABAergic neuron | 7 studies | 45% ± 20% | |
neuron | 5 studies | 34% ± 17% | |
epithelial cell | 5 studies | 30% ± 12% | |
cardiac muscle cell | 5 studies | 39% ± 12% | |
endothelial cell of lymphatic vessel | 5 studies | 26% ± 3% | |
type II pneumocyte | 5 studies | 23% ± 5% | |
interneuron | 5 studies | 43% ± 23% | |
macrophage | 4 studies | 20% ± 5% | |
GABAergic interneuron | 3 studies | 26% ± 4% | |
retinal cone cell | 3 studies | 19% ± 3% | |
mast cell | 3 studies | 16% ± 1% | |
myeloid cell | 3 studies | 18% ± 1% | |
retinal rod cell | 3 studies | 20% ± 3% | |
ependymal cell | 3 studies | 67% ± 5% | |
type I pneumocyte | 3 studies | 19% ± 2% | |
pericyte | 3 studies | 23% ± 4% | |
granule cell | 3 studies | 21% ± 4% | |
smooth muscle cell | 3 studies | 19% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 888.09 | 2641 / 2642 | 100% | 7.39 | 703 / 705 |
thymus | 100% | 1762.90 | 653 / 653 | 99% | 5.07 | 596 / 605 |
kidney | 100% | 758.48 | 89 / 89 | 98% | 3.49 | 885 / 901 |
ovary | 100% | 720.62 | 180 / 180 | 97% | 5.05 | 415 / 430 |
liver | 100% | 524.65 | 226 / 226 | 94% | 3.12 | 380 / 406 |
prostate | 100% | 729.58 | 244 / 245 | 94% | 2.18 | 471 / 502 |
adrenal gland | 100% | 946.64 | 258 / 258 | 93% | 3.21 | 214 / 230 |
breast | 100% | 734.81 | 458 / 459 | 93% | 3.53 | 1041 / 1118 |
lung | 100% | 789.69 | 577 / 578 | 88% | 3.39 | 1016 / 1155 |
pancreas | 99% | 560.52 | 326 / 328 | 87% | 2.04 | 154 / 178 |
uterus | 100% | 854.58 | 170 / 170 | 83% | 2.66 | 379 / 459 |
bladder | 100% | 904.81 | 21 / 21 | 72% | 1.80 | 365 / 504 |
skin | 91% | 308.85 | 1643 / 1809 | 78% | 2.08 | 369 / 472 |
esophagus | 95% | 487.24 | 1367 / 1445 | 70% | 1.57 | 129 / 183 |
stomach | 99% | 506.26 | 355 / 359 | 65% | 1.27 | 186 / 286 |
intestine | 99% | 556.09 | 959 / 966 | 64% | 1.22 | 338 / 527 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.08 | 1 / 1 |
adipose | 100% | 696.42 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 627.13 | 799 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 504.14 | 1325 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 880.75 | 852 / 861 | 0% | 0 | 0 / 0 |
spleen | 98% | 368.17 | 237 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 76% | 1.69 | 34 / 45 |
eye | 0% | 0 | 0 / 0 | 66% | 1.43 | 53 / 80 |
peripheral blood | 65% | 216.90 | 603 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 41% | 0.59 | 12 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0097228 | Cellular component | sperm principal piece |
GO_0005737 | Cellular component | cytoplasm |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | EFCAB2 |
Protein name | EF-hand calcium binding domain 2 Dynein regulatory complex protein 8 (EF-hand calcium-binding domain-containing protein 2) |
Synonyms | DRC8 |
Description | FUNCTION: Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes. . |
Accessions | ENST00000551317.5 H0Y588 H0YHT5 H0Y6F0 ENST00000447569.6 [Q5VUJ9-3] Q5VUJ9 ENST00000427529.1 ENST00000425550.5 ENST00000366523.6 [Q5VUJ9-2] |