Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 22 studies | 76% ± 23% | |
oligodendrocyte | 15 studies | 39% ± 17% | |
oligodendrocyte precursor cell | 15 studies | 62% ± 16% | |
microglial cell | 14 studies | 42% ± 16% | |
glutamatergic neuron | 13 studies | 62% ± 23% | |
GABAergic neuron | 11 studies | 60% ± 25% | |
macrophage | 9 studies | 45% ± 14% | |
smooth muscle cell | 9 studies | 41% ± 12% | |
endothelial cell | 8 studies | 42% ± 16% | |
adipocyte | 8 studies | 24% ± 4% | |
neuron | 6 studies | 46% ± 18% | |
interneuron | 6 studies | 63% ± 22% | |
retinal ganglion cell | 6 studies | 58% ± 24% | |
cardiac muscle cell | 6 studies | 71% ± 20% | |
myeloid cell | 6 studies | 40% ± 11% | |
fibroblast | 5 studies | 27% ± 5% | |
granule cell | 4 studies | 75% ± 11% | |
pericyte | 4 studies | 41% ± 15% | |
dendritic cell | 4 studies | 26% ± 8% | |
mesothelial cell | 4 studies | 45% ± 11% | |
Mueller cell | 4 studies | 57% ± 23% | |
cholangiocyte | 3 studies | 56% ± 23% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 59% ± 7% | |
GABAergic interneuron | 3 studies | 67% ± 7% | |
Purkinje cell | 3 studies | 58% ± 25% | |
amacrine cell | 3 studies | 50% ± 24% | |
GABAergic amacrine cell | 3 studies | 46% ± 23% | |
glycinergic amacrine cell | 3 studies | 52% ± 28% | |
retinal pigment epithelial cell | 3 studies | 54% ± 21% | |
ependymal cell | 3 studies | 83% ± 5% | |
type I pneumocyte | 3 studies | 20% ± 3% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 25605.96 | 2642 / 2642 | 100% | 117.08 | 703 / 705 |
thymus | 85% | 3833.66 | 554 / 653 | 85% | 9.82 | 512 / 605 |
prostate | 49% | 2428.05 | 119 / 245 | 82% | 4.79 | 412 / 502 |
adrenal gland | 32% | 870.98 | 83 / 258 | 77% | 6.68 | 177 / 230 |
breast | 33% | 847.50 | 150 / 459 | 70% | 6.25 | 787 / 1118 |
muscle | 96% | 7083.86 | 771 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 96% | 5591.41 | 1280 / 1335 | 0% | 0 | 0 / 0 |
esophagus | 64% | 5047.92 | 927 / 1445 | 32% | 1.66 | 58 / 183 |
bladder | 67% | 6267.71 | 14 / 21 | 27% | 1.48 | 137 / 504 |
pancreas | 56% | 1451.17 | 184 / 328 | 36% | 1.67 | 64 / 178 |
heart | 89% | 6048.77 | 765 / 861 | 0% | 0 | 0 / 0 |
lung | 36% | 914.50 | 207 / 578 | 50% | 2.80 | 573 / 1155 |
intestine | 64% | 2968.26 | 616 / 966 | 21% | 0.86 | 109 / 527 |
liver | 1% | 28.88 | 3 / 226 | 64% | 4.17 | 258 / 406 |
ovary | 19% | 510.98 | 34 / 180 | 40% | 2.57 | 173 / 430 |
kidney | 0% | 0 | 0 / 89 | 55% | 3.07 | 497 / 901 |
skin | 6% | 163.87 | 107 / 1809 | 46% | 2.45 | 216 / 472 |
uterus | 28% | 839.30 | 48 / 170 | 23% | 1.49 | 107 / 459 |
eye | 0% | 0 | 0 / 0 | 49% | 1.85 | 39 / 80 |
stomach | 18% | 558.61 | 65 / 359 | 20% | 1.04 | 57 / 286 |
adipose | 35% | 1046.95 | 425 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.33 | 4 / 45 |
spleen | 4% | 98.47 | 10 / 241 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007165 | Biological process | signal transduction |
GO_0099536 | Biological process | synaptic signaling |
GO_0006941 | Biological process | striated muscle contraction |
GO_0007268 | Biological process | chemical synaptic transmission |
GO_0007274 | Biological process | neuromuscular synaptic transmission |
GO_0045111 | Cellular component | intermediate filament cytoskeleton |
GO_0030054 | Cellular component | cell junction |
GO_0030424 | Cellular component | axon |
GO_0042383 | Cellular component | sarcolemma |
GO_0032991 | Cellular component | protein-containing complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0045202 | Cellular component | synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0031234 | Cellular component | extrinsic component of cytoplasmic side of plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0030165 | Molecular function | PDZ domain binding |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | DTNA |
Protein name | Dystrobrevin alpha (DTN-A) (Alpha-dystrobrevin) (Dystrophin-related protein 3) Dystrobrevin alpha Alternative protein DTNA Dystrobrevin Dystrobrevin alpha (Dystrobrevin, alpha, isoform CRA_h) Alpha-dystrobrevin |
Synonyms | DRP3 hCG_2021826 |
Description | FUNCTION: May be involved in the formation and stability of synapses as well as being involved in the clustering of nicotinic acetylcholine receptors. |
Accessions | ENST00000599844.5 ENST00000683705.1 [Q9Y4J8-13] ENST00000283365.14 [Q9Y4J8-13] ENST00000680346.1 [Q9Y4J8-5] ENST00000679796 A0A804HKS8 A0A804HKZ4 ENST00000591816.6 A0A804HII4 ENST00000683379.1 [Q9Y4J8-2] A0A7P0T9L1 ENST00000682581.1 ENST00000590412.5 ENST00000681470.1 ENST00000684266.1 ENST00000596745.5 [Q9Y4J8-12] ENST00000684228.1 ENST00000681241.1 [Q9Y4J8-13] ENST00000597599.5 [Q9Y4J8-16] ENST00000680366.1 ENST00000679678.1 A0A804HHU2 ENST00000680767.2 ENST00000598774.6 [Q9Y4J8-5] ENST00000269192.11 [Q9Y4J8-11] ENST00000399113.7 [Q9Y4J8-1] A0A7P0TAU5 D2DGW6 ENST00000679796.1 [Q9Y4J8-17] ENST00000590598.5 ENST00000348997.9 [Q9Y4J8-4] ENST00000597674.5 [Q9Y4J8-8] ENST00000315456.10 [Q9Y4J8-7] A0A7P0TBG1 ENST00000399121.9 [Q9Y4J8-14] M0R021 A0A804HJU0 ENST00000679372.1 A0A7P0T8G2 ENST00000681065.1 M0QZ28 A0A7P0T818 ENST00000601632.6 K7ESB2 L8E9H2 ENST00000680822.1 ENST00000682483.1 [Q9Y4J8-16] ENST00000683876.1 [Q9Y4J8-8] ENST00000684560.1 K7EJ84 A0A804HHT6 K7ERZ2 ENST00000684610.1 [Q9Y4J8-9] ENST00000682129.1 A0A7P0TBH9 ENST00000682406.1 ENST00000601125.5 ENST00000679731.1 ENST00000684734.1 [Q9Y4J8-9] A0A7P0T8Y5 ENST00000591182.5 [Q9Y4J8-6] D2DGW5 ENST00000444659.6 [Q9Y4J8-17] ENST00000683092.1 ENST00000554864.7 [Q9Y4J8-9] A0A7P0T8J4 ENST00000681759.1 ENST00000681274.1 ENST00000679936.1 [Q9Y4J8-5] A0A7P0Z4D7 ENST00000588949.6 A0A7P0TAN3 ENST00000598334.5 [Q9Y4J8-15] ENST00000684377.1 ENST00000556414.7 [Q9Y4J8-10] ENST00000595022.5 [Q9Y4J8-13] ENST00000585446.1 A0A804HII3 Q9Y4J8 K7EMN1 ENST00000588684.5 ENST00000682923.1 ENST00000588125.5 A0A804HLB1 ENST00000683370.1 [Q9Y4J8-16] ENST00000684359.1 [Q9Y4J8-2] K7EIV1 ENST00000598142.5 [Q9Y4J8-2] ENST00000444659 K7ENJ7 |