Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 46 studies | 48% ± 20% | |
endothelial cell of lymphatic vessel | 18 studies | 43% ± 23% | |
oligodendrocyte | 16 studies | 60% ± 19% | |
oligodendrocyte precursor cell | 15 studies | 48% ± 24% | |
capillary endothelial cell | 15 studies | 41% ± 18% | |
endothelial cell of artery | 14 studies | 43% ± 18% | |
vein endothelial cell | 13 studies | 39% ± 25% | |
glutamatergic neuron | 12 studies | 48% ± 22% | |
GABAergic neuron | 10 studies | 49% ± 25% | |
pericyte | 9 studies | 29% ± 9% | |
astrocyte | 8 studies | 30% ± 14% | |
epithelial cell | 8 studies | 33% ± 19% | |
basal cell | 8 studies | 38% ± 23% | |
endothelial cell of vascular tree | 7 studies | 45% ± 26% | |
smooth muscle cell | 6 studies | 35% ± 14% | |
interneuron | 6 studies | 53% ± 30% | |
fibroblast | 6 studies | 34% ± 15% | |
T cell | 6 studies | 26% ± 8% | |
type II pneumocyte | 6 studies | 49% ± 13% | |
neuron | 5 studies | 35% ± 19% | |
retinal ganglion cell | 5 studies | 24% ± 15% | |
retinal cone cell | 5 studies | 36% ± 17% | |
club cell | 5 studies | 37% ± 17% | |
type I pneumocyte | 5 studies | 31% ± 7% | |
granule cell | 4 studies | 36% ± 3% | |
microglial cell | 4 studies | 34% ± 17% | |
amacrine cell | 4 studies | 25% ± 6% | |
lymphocyte | 4 studies | 32% ± 2% | |
endothelial cell of sinusoid | 3 studies | 24% ± 3% | |
glomerular endothelial cell | 3 studies | 28% ± 1% | |
GABAergic interneuron | 3 studies | 50% ± 4% | |
squamous epithelial cell | 3 studies | 52% ± 21% | |
CD4-positive, alpha-beta T cell | 3 studies | 26% ± 3% | |
GABAergic amacrine cell | 3 studies | 27% ± 10% | |
Mueller cell | 3 studies | 21% ± 7% | |
OFF-bipolar cell | 3 studies | 31% ± 12% | |
ciliated cell | 3 studies | 27% ± 10% | |
respiratory goblet cell | 3 studies | 47% ± 18% | |
mural cell | 3 studies | 57% ± 10% | |
mucus secreting cell | 3 studies | 37% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 9261.17 | 1445 / 1445 | 99% | 24.71 | 182 / 183 |
intestine | 100% | 5860.30 | 965 / 966 | 98% | 14.68 | 518 / 527 |
thymus | 100% | 8440.87 | 653 / 653 | 98% | 63.32 | 590 / 605 |
lung | 100% | 14138.74 | 577 / 578 | 97% | 18.35 | 1123 / 1155 |
breast | 100% | 10884.17 | 459 / 459 | 96% | 18.36 | 1076 / 1118 |
bladder | 100% | 4385.33 | 21 / 21 | 93% | 13.48 | 470 / 504 |
prostate | 100% | 3686.91 | 244 / 245 | 93% | 12.05 | 465 / 502 |
brain | 99% | 6660.64 | 2618 / 2642 | 92% | 12.92 | 646 / 705 |
stomach | 94% | 2812.59 | 336 / 359 | 97% | 14.90 | 277 / 286 |
uterus | 100% | 5285.06 | 170 / 170 | 90% | 12.77 | 412 / 459 |
ovary | 100% | 4063.55 | 180 / 180 | 88% | 9.79 | 379 / 430 |
skin | 92% | 7377.25 | 1665 / 1809 | 87% | 9.78 | 412 / 472 |
kidney | 90% | 2665.79 | 80 / 89 | 82% | 16.43 | 736 / 901 |
adrenal gland | 98% | 3148.37 | 253 / 258 | 68% | 6.31 | 157 / 230 |
pancreas | 57% | 1066.27 | 188 / 328 | 96% | 16.41 | 170 / 178 |
adipose | 100% | 11557.68 | 1204 / 1204 | 0% | 0 | 0 / 0 |
heart | 99% | 4280.33 | 850 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 3997.16 | 1316 / 1335 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 18.09 | 42 / 45 |
spleen | 88% | 2068.85 | 212 / 241 | 0% | 0 | 0 / 0 |
muscle | 86% | 2196.91 | 691 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 66% | 7.87 | 19 / 29 |
liver | 17% | 293.35 | 39 / 226 | 46% | 3.33 | 188 / 406 |
eye | 0% | 0 | 0 / 0 | 26% | 1.66 | 21 / 80 |
peripheral blood | 7% | 169.91 | 68 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0043547 | Biological process | positive regulation of GTPase activity |
GO_0008150 | Biological process | biological_process |
GO_0007264 | Biological process | small GTPase-mediated signal transduction |
GO_0012505 | Cellular component | endomembrane system |
GO_0005829 | Cellular component | cytosol |
GO_0016020 | Cellular component | membrane |
GO_0045296 | Molecular function | cadherin binding |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | DOCK9 |
Protein name | Dedicator of cytokinesis protein 9 (Cdc42 guanine nucleotide exchange factor zizimin-1) (Zizimin-1) Dedicator of cytokinesis 9 (cDNA FLJ45400 fis, clone BRHIP3028570) DOCK9 Dedicator of cytokinesis 9 DOCK9 protein |
Synonyms | hCG_29512 ZIZ1 KIAA1058 |
Description | FUNCTION: Guanine nucleotide-exchange factor (GEF) that activates CDC42 by exchanging bound GDP for free GTP. Overexpression induces filopodia formation. . |
Accessions | ENST00000652315.1 [Q9BZ29-1] ENST00000450257.2 A0A1B0GVL8 A0A088AWN3 ENST00000427887.2 ENST00000630992.2 ENST00000339416.7 ENST00000376460.5 [Q9BZ29-5] ENST00000703211.1 Q5JUD8 ENST00000400228.6 A0A8V8TRI9 ENST00000703216.1 H0Y572 ENST00000479769.1 B9EG73 A0A0A0MT38 ENST00000682017.1 A0A0D9SFH5 X6RGR3 ENST00000449796.6 ENST00000627024.2 [Q9BZ29-6] ENST00000448493.7 ENST00000340449.7 A0A804HIE8 Q6ZSL5 Q9BZ29 A0A8V8TQS9 A0A0D9SF41 B7ZVX0 A0A2X0SYY4 H7BZ79 ENST00000638020.1 A6H8Z6 ENST00000703210.1 Q7Z6H4 ENST00000419908.5 H0Y3S1 A0A8V8TR95 |