Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 23 studies | 46% ± 17% | |
oligodendrocyte | 16 studies | 43% ± 15% | |
oligodendrocyte precursor cell | 16 studies | 63% ± 19% | |
GABAergic neuron | 11 studies | 62% ± 20% | |
glutamatergic neuron | 7 studies | 48% ± 22% | |
amacrine cell | 7 studies | 46% ± 17% | |
interneuron | 7 studies | 64% ± 25% | |
retinal ganglion cell | 7 studies | 64% ± 21% | |
neuron | 6 studies | 43% ± 17% | |
ON-bipolar cell | 5 studies | 39% ± 13% | |
endothelial cell | 4 studies | 35% ± 21% | |
GABAergic amacrine cell | 4 studies | 42% ± 14% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 57% ± 4% | |
retinal bipolar neuron | 3 studies | 23% ± 5% | |
GABAergic interneuron | 3 studies | 65% ± 3% | |
epithelial cell | 3 studies | 41% ± 7% | |
granule cell | 3 studies | 24% ± 5% | |
microglial cell | 3 studies | 38% ± 17% | |
glycinergic amacrine cell | 3 studies | 36% ± 12% | |
neural progenitor cell | 3 studies | 30% ± 13% | |
ependymal cell | 3 studies | 46% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 9078.58 | 2642 / 2642 | 100% | 401.50 | 704 / 705 |
adrenal gland | 100% | 10969.98 | 258 / 258 | 93% | 172.26 | 214 / 230 |
stomach | 61% | 978.32 | 219 / 359 | 2% | 2.75 | 6 / 286 |
kidney | 49% | 687.55 | 44 / 89 | 13% | 5.81 | 121 / 901 |
skin | 51% | 1049.12 | 931 / 1809 | 10% | 6.52 | 47 / 472 |
intestine | 34% | 393.58 | 325 / 966 | 3% | 1.67 | 16 / 527 |
heart | 32% | 625.19 | 278 / 861 | 0% | 0 | 0 / 0 |
uterus | 21% | 230.21 | 36 / 170 | 9% | 2.77 | 41 / 459 |
prostate | 3% | 32.98 | 7 / 245 | 14% | 3.46 | 72 / 502 |
lung | 2% | 17.96 | 10 / 578 | 12% | 3.69 | 139 / 1155 |
pancreas | 0% | 0 | 0 / 328 | 9% | 3.26 | 16 / 178 |
tonsil | 0% | 0 | 0 / 0 | 9% | 1.33 | 4 / 45 |
breast | 2% | 45.04 | 11 / 459 | 6% | 2.28 | 68 / 1118 |
blood vessel | 8% | 98.37 | 104 / 1335 | 0% | 0 | 0 / 0 |
esophagus | 2% | 23.71 | 32 / 1445 | 5% | 1.29 | 10 / 183 |
eye | 0% | 0 | 0 / 0 | 8% | 2.74 | 6 / 80 |
liver | 0% | 0 | 0 / 226 | 7% | 4.76 | 30 / 406 |
adipose | 7% | 97.23 | 83 / 1204 | 0% | 0 | 0 / 0 |
bladder | 0% | 0 | 0 / 21 | 5% | 1.87 | 24 / 504 |
ovary | 1% | 9.32 | 2 / 180 | 3% | 0.62 | 15 / 430 |
lymph node | 0% | 0 | 0 / 0 | 3% | 0.79 | 1 / 29 |
muscle | 1% | 12.41 | 9 / 803 | 0% | 0 | 0 / 0 |
thymus | 0% | 0 | 0 / 653 | 1% | 0.31 | 6 / 605 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010001 | Biological process | glial cell differentiation |
GO_0007220 | Biological process | Notch receptor processing |
GO_0048741 | Biological process | skeletal muscle fiber development |
GO_0007416 | Biological process | synapse assembly |
GO_0001764 | Biological process | neuron migration |
GO_0006897 | Biological process | endocytosis |
GO_0007219 | Biological process | Notch signaling pathway |
GO_0007417 | Biological process | central nervous system development |
GO_0030425 | Cellular component | dendrite |
GO_0043025 | Cellular component | neuronal cell body |
GO_0005886 | Cellular component | plasma membrane |
GO_0005769 | Cellular component | early endosome |
GO_0030276 | Molecular function | clathrin binding |
GO_0004888 | Molecular function | transmembrane signaling receptor activity |
GO_0005112 | Molecular function | Notch binding |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | DNER |
Protein name | Delta and Notch-like epidermal growth factor-related receptor |
Synonyms | UNQ262/PRO299 BET |
Description | FUNCTION: Activator of the NOTCH1 pathway. May mediate neuron-glia interaction during astrocytogenesis (By similarity). . |
Accessions | ENST00000341772.5 Q8NFT8 |