Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 11 studies | 37% ± 13% | |
ciliated cell | 10 studies | 31% ± 13% | |
glutamatergic neuron | 8 studies | 29% ± 17% | |
astrocyte | 8 studies | 26% ± 12% | |
smooth muscle cell | 7 studies | 22% ± 4% | |
retinal cone cell | 7 studies | 29% ± 8% | |
endothelial cell | 6 studies | 32% ± 12% | |
interneuron | 6 studies | 40% ± 24% | |
retina horizontal cell | 6 studies | 34% ± 9% | |
GABAergic neuron | 6 studies | 40% ± 22% | |
granule cell | 4 studies | 25% ± 8% | |
neuron | 4 studies | 26% ± 12% | |
epithelial cell | 4 studies | 22% ± 7% | |
adipocyte | 4 studies | 24% ± 3% | |
retinal rod cell | 4 studies | 30% ± 8% | |
GABAergic interneuron | 3 studies | 25% ± 4% | |
fibroblast | 3 studies | 30% ± 12% | |
Mueller cell | 3 studies | 22% ± 5% | |
oligodendrocyte precursor cell | 3 studies | 23% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 3854.55 | 2611 / 2642 | 100% | 18.09 | 703 / 705 |
prostate | 99% | 3830.80 | 242 / 245 | 98% | 15.84 | 494 / 502 |
breast | 100% | 3637.09 | 459 / 459 | 96% | 15.01 | 1072 / 1118 |
adrenal gland | 98% | 3149.87 | 254 / 258 | 96% | 17.81 | 220 / 230 |
thymus | 99% | 2259.19 | 648 / 653 | 88% | 10.35 | 533 / 605 |
kidney | 87% | 1330.10 | 77 / 89 | 95% | 20.83 | 853 / 901 |
lung | 92% | 1648.25 | 531 / 578 | 81% | 6.40 | 931 / 1155 |
intestine | 94% | 5414.66 | 908 / 966 | 77% | 5.29 | 407 / 527 |
ovary | 100% | 2209.52 | 180 / 180 | 68% | 4.20 | 293 / 430 |
stomach | 87% | 3585.03 | 314 / 359 | 79% | 7.84 | 227 / 286 |
esophagus | 87% | 4888.44 | 1258 / 1445 | 76% | 5.93 | 139 / 183 |
skin | 85% | 1404.48 | 1541 / 1809 | 71% | 7.54 | 335 / 472 |
bladder | 100% | 6695.71 | 21 / 21 | 55% | 4.11 | 276 / 504 |
uterus | 99% | 5155.78 | 168 / 170 | 49% | 5.29 | 224 / 459 |
pancreas | 25% | 251.11 | 81 / 328 | 88% | 7.63 | 157 / 178 |
blood vessel | 100% | 7259.91 | 1335 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 3809.13 | 1202 / 1204 | 0% | 0 | 0 / 0 |
heart | 82% | 1759.14 | 710 / 861 | 0% | 0 | 0 / 0 |
liver | 25% | 255.72 | 57 / 226 | 45% | 2.69 | 181 / 406 |
eye | 0% | 0 | 0 / 0 | 44% | 2.18 | 35 / 80 |
muscle | 43% | 559.83 | 342 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 36% | 1.50 | 16 / 45 |
spleen | 22% | 238.59 | 52 / 241 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 7% | 0.28 | 2 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0070507 | Biological process | regulation of microtubule cytoskeleton organization |
GO_0045665 | Biological process | negative regulation of neuron differentiation |
GO_0021869 | Biological process | forebrain ventricular zone progenitor cell division |
GO_0030177 | Biological process | positive regulation of Wnt signaling pathway |
GO_0032956 | Biological process | regulation of actin cytoskeleton organization |
GO_0021799 | Biological process | cerebral cortex radially oriented cell migration |
GO_0060070 | Biological process | canonical Wnt signaling pathway |
GO_0001725 | Cellular component | stress fiber |
GO_0005829 | Cellular component | cytosol |
GO_0005925 | Cellular component | focal adhesion |
GO_0043015 | Molecular function | gamma-tubulin binding |
GO_0019904 | Molecular function | protein domain specific binding |
GO_0005515 | Molecular function | protein binding |
GO_0003779 | Molecular function | actin binding |
Gene name | DIXDC1 |
Protein name | DIX domain containing 1 Dixin (Coiled-coil protein DIX1) (Coiled-coil-DIX1) (DIX domain-containing protein 1) |
Synonyms | KIAA1735 CCD1 |
Description | FUNCTION: Positive effector of the Wnt signaling pathway; activates WNT3A signaling via DVL2. Regulates JNK activation by AXIN1 and DVL2. . |
Accessions | Q155Q3 A0A087WVH1 ENST00000440460.7 [Q155Q3-1] ENST00000529225.5 [Q155Q3-5] ENST00000614104.4 ENST00000615255.1 [Q155Q3-2] |