Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 12 studies | 26% ± 11% | |
epithelial cell | 8 studies | 38% ± 16% | |
macrophage | 8 studies | 29% ± 9% | |
retinal cone cell | 7 studies | 29% ± 12% | |
microglial cell | 6 studies | 21% ± 5% | |
retinal rod cell | 6 studies | 24% ± 5% | |
type I pneumocyte | 6 studies | 27% ± 7% | |
epithelial cell of proximal tubule | 5 studies | 25% ± 6% | |
platelet | 5 studies | 23% ± 6% | |
myeloid cell | 5 studies | 20% ± 2% | |
fibroblast | 5 studies | 20% ± 4% | |
hepatocyte | 4 studies | 45% ± 15% | |
oligodendrocyte precursor cell | 4 studies | 22% ± 6% | |
dendritic cell | 4 studies | 27% ± 10% | |
goblet cell | 4 studies | 24% ± 8% | |
endothelial cell of lymphatic vessel | 4 studies | 20% ± 5% | |
astrocyte | 4 studies | 29% ± 11% | |
non-classical monocyte | 3 studies | 22% ± 5% | |
ciliated cell | 3 studies | 28% ± 5% | |
type II pneumocyte | 3 studies | 24% ± 3% | |
glutamatergic neuron | 3 studies | 25% ± 4% | |
enteroendocrine cell | 3 studies | 21% ± 7% | |
basal cell | 3 studies | 51% ± 13% | |
transit amplifying cell | 3 studies | 40% ± 30% | |
adipocyte | 3 studies | 19% ± 1% | |
plasmacytoid dendritic cell | 3 studies | 22% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1617.77 | 1445 / 1445 | 100% | 46.06 | 183 / 183 |
pancreas | 100% | 881.31 | 328 / 328 | 100% | 40.41 | 178 / 178 |
stomach | 100% | 942.02 | 359 / 359 | 100% | 40.81 | 286 / 286 |
lung | 100% | 1540.53 | 577 / 578 | 100% | 60.05 | 1155 / 1155 |
skin | 100% | 1686.54 | 1809 / 1809 | 100% | 62.63 | 471 / 472 |
uterus | 100% | 1188.36 | 170 / 170 | 100% | 53.16 | 458 / 459 |
brain | 100% | 719.76 | 2634 / 2642 | 100% | 46.44 | 705 / 705 |
kidney | 100% | 2342.52 | 89 / 89 | 100% | 70.65 | 897 / 901 |
breast | 100% | 1376.34 | 459 / 459 | 100% | 35.35 | 1113 / 1118 |
ovary | 100% | 552.40 | 180 / 180 | 100% | 41.20 | 428 / 430 |
liver | 100% | 1900.38 | 226 / 226 | 100% | 43.73 | 404 / 406 |
intestine | 100% | 1918.46 | 966 / 966 | 99% | 46.44 | 524 / 527 |
thymus | 100% | 1689.70 | 653 / 653 | 99% | 50.98 | 601 / 605 |
bladder | 100% | 1119.76 | 21 / 21 | 99% | 43.93 | 499 / 504 |
adrenal gland | 100% | 1158.34 | 258 / 258 | 97% | 25.52 | 223 / 230 |
prostate | 100% | 1030.92 | 245 / 245 | 93% | 17.55 | 466 / 502 |
adipose | 100% | 1458.74 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 50.16 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 32.58 | 29 / 29 |
spleen | 100% | 1134.41 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 62.13 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.96 | 1 / 1 |
blood vessel | 100% | 826.23 | 1332 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 942.52 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 97% | 709.82 | 837 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 83% | 898.61 | 769 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006098 | Biological process | pentose-phosphate shunt |
GO_0009264 | Biological process | deoxyribonucleotide catabolic process |
GO_0016052 | Biological process | carbohydrate catabolic process |
GO_0046121 | Biological process | deoxyribonucleoside catabolic process |
GO_0046386 | Biological process | deoxyribose phosphate catabolic process |
GO_1904813 | Cellular component | ficolin-1-rich granule lumen |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005576 | Cellular component | extracellular region |
GO_0034774 | Cellular component | secretory granule lumen |
GO_0004139 | Molecular function | deoxyribose-phosphate aldolase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | DERA |
Protein name | Deoxyribose-phosphate aldolase (DERA) (EC 4.1.2.4) (2-deoxy-D-ribose 5-phosphate aldolase) (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) deoxyribose-phosphate aldolase (EC 4.1.2.4) (2-deoxy-D-ribose 5-phosphate aldolase) (Phosphodeoxyriboaldolase) Deoxyribose-phosphate aldolase |
Synonyms | hCG_25164 CGI-26 |
Description | FUNCTION: Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate. Participates in stress granule (SG) assembly. May allow ATP production from extracellular deoxyinosine in conditions of energy deprivation. . |
Accessions | ENST00000526521.5 E9PMH9 G3V158 ENST00000524480.5 ENST00000528821.5 Q9Y315 ENST00000533447.5 E9PPM8 E9PJ44 ENST00000526530.1 ENST00000531803.5 E9PJB9 ENST00000428559.7 ENST00000532964.5 E9PML7 E9PPK3 |