Name | Number of supported studies | Average coverage | |
---|---|---|---|
CD8-positive, alpha-beta T cell | 9 studies | 19% ± 4% | |
natural killer cell | 9 studies | 20% ± 4% | |
CD16-positive, CD56-dim natural killer cell, human | 8 studies | 21% ± 3% | |
CD16-negative, CD56-bright natural killer cell, human | 7 studies | 19% ± 2% | |
CD4-positive, alpha-beta T cell | 7 studies | 19% ± 2% | |
plasmacytoid dendritic cell | 7 studies | 24% ± 7% | |
B cell | 6 studies | 21% ± 3% | |
regulatory T cell | 6 studies | 18% ± 3% | |
epithelial cell | 4 studies | 39% ± 14% | |
endothelial cell | 4 studies | 21% ± 7% | |
ciliated cell | 4 studies | 29% ± 8% | |
CD4-positive, alpha-beta memory T cell | 4 studies | 19% ± 4% | |
gamma-delta T cell | 4 studies | 24% ± 14% | |
classical monocyte | 3 studies | 30% ± 6% | |
conventional dendritic cell | 3 studies | 32% ± 11% | |
exhausted T cell | 3 studies | 23% ± 4% | |
mature NK T cell | 3 studies | 17% ± 1% | |
non-classical monocyte | 3 studies | 33% ± 5% | |
placental villous trophoblast | 3 studies | 23% ± 4% | |
precursor B cell | 3 studies | 20% ± 0% | |
fibroblast | 3 studies | 21% ± 5% | |
GABAergic neuron | 3 studies | 23% ± 5% | |
dendritic cell | 3 studies | 35% ± 16% | |
neuron | 3 studies | 26% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 2765.70 | 258 / 258 | 100% | 37.55 | 230 / 230 |
brain | 100% | 3110.71 | 2642 / 2642 | 100% | 41.25 | 705 / 705 |
esophagus | 100% | 2355.38 | 1445 / 1445 | 100% | 37.80 | 183 / 183 |
ovary | 100% | 1660.06 | 180 / 180 | 100% | 54.11 | 430 / 430 |
stomach | 100% | 1884.21 | 359 / 359 | 100% | 31.87 | 286 / 286 |
uterus | 100% | 2018.97 | 170 / 170 | 100% | 38.05 | 459 / 459 |
lung | 100% | 2408.07 | 578 / 578 | 100% | 32.10 | 1153 / 1155 |
intestine | 100% | 2482.97 | 966 / 966 | 100% | 32.48 | 526 / 527 |
skin | 100% | 2772.91 | 1809 / 1809 | 100% | 37.53 | 471 / 472 |
liver | 100% | 1346.68 | 226 / 226 | 100% | 21.05 | 405 / 406 |
thymus | 100% | 2039.97 | 652 / 653 | 100% | 30.51 | 604 / 605 |
bladder | 100% | 2185.00 | 21 / 21 | 100% | 36.41 | 502 / 504 |
prostate | 100% | 2432.21 | 245 / 245 | 100% | 27.15 | 500 / 502 |
kidney | 100% | 2113.40 | 89 / 89 | 100% | 23.54 | 897 / 901 |
breast | 100% | 2063.44 | 459 / 459 | 99% | 30.91 | 1111 / 1118 |
pancreas | 98% | 877.39 | 322 / 328 | 99% | 34.27 | 177 / 178 |
adipose | 100% | 2004.32 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 31.73 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 33.04 | 29 / 29 |
spleen | 100% | 2284.60 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 40.66 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 30.03 | 1 / 1 |
blood vessel | 100% | 2446.68 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 1495.15 | 801 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1724.29 | 856 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 1550.55 | 904 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0032436 | Biological process | positive regulation of proteasomal ubiquitin-dependent protein catabolic process |
GO_0000209 | Biological process | protein polyubiquitination |
GO_0005654 | Cellular component | nucleoplasm |
GO_0080008 | Cellular component | Cul4-RING E3 ubiquitin ligase complex |
GO_0005515 | Molecular function | protein binding |
Gene name | DDA1 |
Protein name | DET1- and DDB1-associated protein 1 (Placenta cross-immune reaction antigen 1) (PCIA-1) |
Synonyms | C19orf58 PCIA1 |
Description | FUNCTION: Functions as a component of numerous distinct DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins . In the DCX complexes, acts as a scaffolding subunit required to stabilize the complex . . |
Accessions | ENST00000593466.5 ENST00000596582.1 Q9BW61 ENST00000359866.9 |