Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| endothelial cell | 17 studies | 25% ± 11% | |
| astrocyte | 11 studies | 33% ± 17% | |
| oligodendrocyte | 11 studies | 28% ± 12% | |
| glutamatergic neuron | 10 studies | 44% ± 27% | |
| oligodendrocyte precursor cell | 10 studies | 33% ± 14% | |
| fibroblast | 9 studies | 20% ± 4% | |
| GABAergic neuron | 8 studies | 45% ± 23% | |
| macrophage | 8 studies | 24% ± 6% | |
| neuron | 6 studies | 37% ± 14% | |
| interneuron | 6 studies | 45% ± 23% | |
| microglial cell | 6 studies | 27% ± 7% | |
| epithelial cell | 5 studies | 33% ± 11% | |
| adipocyte | 5 studies | 20% ± 2% | |
| ciliated cell | 5 studies | 23% ± 4% | |
| endothelial cell of lymphatic vessel | 5 studies | 21% ± 2% | |
| pericyte | 5 studies | 18% ± 3% | |
| granule cell | 4 studies | 25% ± 5% | |
| amacrine cell | 4 studies | 21% ± 3% | |
| retinal rod cell | 4 studies | 21% ± 5% | |
| type I pneumocyte | 4 studies | 18% ± 3% | |
| monocyte | 4 studies | 20% ± 3% | |
| smooth muscle cell | 4 studies | 18% ± 1% | |
| hematopoietic precursor cell | 3 studies | 21% ± 5% | |
| GABAergic interneuron | 3 studies | 27% ± 5% | |
| retina horizontal cell | 3 studies | 18% ± 1% | |
| cardiac muscle cell | 3 studies | 18% ± 2% | |
| lymphocyte | 3 studies | 21% ± 1% | |
| GABAergic amacrine cell | 3 studies | 20% ± 4% | |
| glycinergic amacrine cell | 3 studies | 19% ± 3% | |
| type II pneumocyte | 3 studies | 19% ± 3% | |
| B cell | 3 studies | 21% ± 4% | |
| dendritic cell | 3 studies | 23% ± 5% | |
| neural progenitor cell | 3 studies | 21% ± 2% | |
| alveolar macrophage | 3 studies | 19% ± 5% | |
| myofibroblast cell | 3 studies | 18% ± 3% | |
| basal cell | 3 studies | 31% ± 4% | |
| transit amplifying cell | 3 studies | 26% ± 13% | |
| T cell | 3 studies | 18% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 1240.49 | 2642 / 2642 | 100% | 29.97 | 705 / 705 |
| esophagus | 100% | 1209.34 | 1445 / 1445 | 100% | 14.66 | 183 / 183 |
| prostate | 100% | 1043.71 | 245 / 245 | 100% | 19.67 | 502 / 502 |
| uterus | 100% | 1348.01 | 170 / 170 | 100% | 26.62 | 459 / 459 |
| breast | 100% | 1146.40 | 459 / 459 | 100% | 24.09 | 1117 / 1118 |
| ovary | 100% | 1368.98 | 180 / 180 | 100% | 13.06 | 429 / 430 |
| lung | 100% | 1003.28 | 577 / 578 | 100% | 18.43 | 1154 / 1155 |
| bladder | 100% | 1294.19 | 21 / 21 | 99% | 19.75 | 501 / 504 |
| thymus | 100% | 1031.58 | 653 / 653 | 99% | 22.24 | 601 / 605 |
| intestine | 100% | 1251.77 | 966 / 966 | 99% | 18.43 | 522 / 527 |
| stomach | 100% | 840.32 | 359 / 359 | 99% | 17.06 | 282 / 286 |
| kidney | 100% | 873.42 | 89 / 89 | 99% | 16.49 | 888 / 901 |
| adrenal gland | 100% | 1061.14 | 258 / 258 | 98% | 19.60 | 226 / 230 |
| pancreas | 97% | 459.75 | 319 / 328 | 100% | 18.13 | 178 / 178 |
| skin | 100% | 1389.25 | 1808 / 1809 | 95% | 19.56 | 450 / 472 |
| liver | 92% | 372.29 | 209 / 226 | 98% | 11.25 | 396 / 406 |
| adipose | 100% | 1134.51 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 1386.21 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 24.44 | 29 / 29 |
| spleen | 100% | 944.63 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 24.92 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 10.24 | 1 / 1 |
| muscle | 100% | 1113.00 | 802 / 803 | 0% | 0 | 0 / 0 |
| heart | 98% | 1074.55 | 841 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 81% | 9.02 | 65 / 80 |
| peripheral blood | 74% | 791.02 | 691 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0000398 | Biological process | mRNA splicing, via spliceosome |
| GO_0006457 | Biological process | protein folding |
| GO_0071005 | Cellular component | U2-type precatalytic spliceosome |
| GO_0071013 | Cellular component | catalytic step 2 spliceosome |
| GO_0005654 | Cellular component | nucleoplasm |
| GO_0003755 | Molecular function | peptidyl-prolyl cis-trans isomerase activity |
| GO_0016018 | Molecular function | cyclosporin A binding |
| Gene name | CWC27 |
| Protein name | CWC27 spliceosome associated cyclophilin Spliceosome-associated protein CWC27 homolog (Probable inactive peptidyl-prolyl cis-trans isomerase CWC27 homolog) Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) Spliceosome-associated protein CWC27 homolog (Antigen NY-CO-10) (Probable inactive peptidyl-prolyl cis-trans isomerase CWC27 homolog) (PPIase CWC27) (Serologically defined colon cancer antigen 10) |
| Synonyms | hCG_17875 SDCCAG10 UNQ438/PRO871 |
| Description | FUNCTION: As part of the spliceosome, plays a role in pre-mRNA splicing . Probable inactive PPIase with no peptidyl-prolyl cis-trans isomerase activity . As a component of the minor spliceosome, involved in the splicing of U12-type introns in pre-mRNAs (Probable). . FUNCTION: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. . |
| Accessions | A0A8I5KQW2 ENST00000692005.1 ENST00000607786.2 ENST00000693640.1 A0A8I5KUR8 ENST00000688107.1 A0A8I5KZ67 A0A8I5KT14 A0A8I5KXM7 A0A8I5KST0 ENST00000688564.1 ENST00000381070.8 [Q6UX04-1] ENST00000692660.1 ENST00000691921.1 A0A8I5KUW8 ENST00000693303.1 ENST00000688896.1 ENST00000688318.1 A0A8I5KP30 A0A8I5KRH9 A0A8I5KW10 ENST00000685023.1 A0A8I5KRF5 D6REK3 ENST00000693660.1 A0A8I5KP46 ENST00000685234.1 ENST00000692763.1 Q6UX04 ENST00000689574.1 A0A8I5KPF6 A0A8I5KY88 A0A8I5KQK1 ENST00000687314.1 A0A8I5KX65 ENST00000506168.2 A0A8I5KU89 ENST00000508024.2 |