Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 16 studies | 90% ± 13% | |
astrocyte | 12 studies | 43% ± 21% | |
oligodendrocyte precursor cell | 11 studies | 41% ± 19% | |
glutamatergic neuron | 9 studies | 53% ± 25% | |
smooth muscle cell | 9 studies | 46% ± 19% | |
GABAergic neuron | 8 studies | 53% ± 20% | |
endothelial cell | 7 studies | 43% ± 17% | |
microglial cell | 7 studies | 41% ± 24% | |
neuron | 6 studies | 34% ± 15% | |
interneuron | 6 studies | 40% ± 22% | |
cardiac muscle cell | 6 studies | 86% ± 14% | |
pericyte | 5 studies | 33% ± 19% | |
mesothelial cell | 4 studies | 37% ± 15% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 59% ± 21% | |
GABAergic interneuron | 3 studies | 28% ± 9% | |
Purkinje cell | 3 studies | 54% ± 32% | |
glial cell | 3 studies | 54% ± 26% | |
granule cell | 3 studies | 40% ± 12% | |
GABAergic amacrine cell | 3 studies | 25% ± 6% | |
adipocyte | 3 studies | 24% ± 8% | |
hepatocyte | 3 studies | 58% ± 22% | |
ciliated cell | 3 studies | 23% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 97% | 2062.44 | 2558 / 2642 | 85% | 6.19 | 596 / 705 |
muscle | 100% | 1675.62 | 803 / 803 | 0% | 0 | 0 / 0 |
heart | 94% | 2102.42 | 811 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 68% | 331.60 | 908 / 1335 | 0% | 0 | 0 / 0 |
esophagus | 56% | 452.11 | 807 / 1445 | 8% | 0.39 | 15 / 183 |
intestine | 58% | 399.56 | 556 / 966 | 3% | 0.09 | 16 / 527 |
ovary | 45% | 158.89 | 81 / 180 | 1% | 0.05 | 5 / 430 |
liver | 38% | 129.24 | 86 / 226 | 7% | 0.26 | 30 / 406 |
stomach | 35% | 394.62 | 126 / 359 | 10% | 0.37 | 28 / 286 |
bladder | 33% | 119.71 | 7 / 21 | 3% | 0.06 | 17 / 504 |
uterus | 22% | 64.51 | 38 / 170 | 4% | 0.14 | 20 / 459 |
adipose | 20% | 60.17 | 239 / 1204 | 0% | 0 | 0 / 0 |
breast | 11% | 32.14 | 50 / 459 | 2% | 0.05 | 22 / 1118 |
adrenal gland | 0% | 0 | 0 / 258 | 11% | 0.21 | 26 / 230 |
prostate | 6% | 16.45 | 15 / 245 | 2% | 0.06 | 11 / 502 |
kidney | 0% | 0 | 0 / 89 | 6% | 0.08 | 50 / 901 |
pancreas | 0% | 0 | 0 / 328 | 4% | 0.39 | 8 / 178 |
lung | 0% | 1.49 | 1 / 578 | 4% | 0.18 | 46 / 1155 |
tonsil | 0% | 0 | 0 / 0 | 2% | 0.03 | 1 / 45 |
skin | 0% | 1.78 | 9 / 1809 | 1% | 0.02 | 6 / 472 |
thymus | 1% | 3.00 | 8 / 653 | 0% | 0.00 | 1 / 605 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0098911 | Biological process | regulation of ventricular cardiac muscle cell action potential |
GO_0098609 | Biological process | cell-cell adhesion |
GO_0016477 | Biological process | cell migration |
GO_0086073 | Biological process | bundle of His cell-Purkinje myocyte adhesion involved in cell communication |
GO_0086091 | Biological process | regulation of heart rate by cardiac conduction |
GO_0005916 | Cellular component | fascia adherens |
GO_0030057 | Cellular component | desmosome |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005912 | Cellular component | adherens junction |
GO_0030027 | Cellular component | lamellipodium |
GO_0005737 | Cellular component | cytoplasm |
GO_0045296 | Molecular function | cadherin binding |
GO_0051015 | Molecular function | actin filament binding |
GO_0008013 | Molecular function | beta-catenin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CTNNA3 |
Protein name | CTNNA3 protein Alpha-T-catenin isoform 2 Catenin alpha 3 Catenin (Cadherin-associated protein), alpha 3, isoform CRA_a (cDNA FLJ78082, highly similar to Homo sapiens alphaT-catenin (CTNNA3) mRNA) (cDNA, FLJ94516, highly similar to Homo sapiens catenin (cadherin-associated protein), alpha 3 (CTNNA3), mRNA) Catenin alpha-3 (Alpha T-catenin) (Cadherin-associated protein) Alternative protein CTNNA3 |
Synonyms | hCG_1810899 |
Description | FUNCTION: May be involved in formation of stretch-resistant cell-cell adhesion complexes. . |
Accessions | F2Z2R0 Q8WW10 ENST00000682945.1 ENST00000683624.1 V9GYW4 Q6XYS1 Q5SW23 ENST00000494580.1 L8E9K0 ENST00000330298.6 A8K141 A0A804HIE3 Q9UI47 ENST00000684154.1 [Q9UI47-1] A0A804HI07 ENST00000545309.3 ENST00000682166.1 ENST00000683963.1 ENST00000433211.7 [Q9UI47-1] ENST00000682758.1 [Q9UI47-1] |