Name | Number of supported studies | Average coverage | |
---|---|---|---|
fibroblast | 18 studies | 27% ± 11% | |
oligodendrocyte | 16 studies | 70% ± 17% | |
oligodendrocyte precursor cell | 16 studies | 45% ± 15% | |
classical monocyte | 14 studies | 25% ± 10% | |
endothelial cell of lymphatic vessel | 13 studies | 37% ± 14% | |
endothelial cell | 13 studies | 25% ± 8% | |
astrocyte | 10 studies | 33% ± 16% | |
monocyte | 9 studies | 26% ± 8% | |
dendritic cell | 7 studies | 24% ± 7% | |
macrophage | 6 studies | 26% ± 6% | |
myeloid cell | 6 studies | 28% ± 7% | |
neutrophil | 5 studies | 18% ± 2% | |
connective tissue cell | 5 studies | 29% ± 10% | |
microglial cell | 5 studies | 35% ± 18% | |
cardiac muscle cell | 5 studies | 27% ± 6% | |
smooth muscle cell | 5 studies | 21% ± 7% | |
glutamatergic neuron | 4 studies | 38% ± 15% | |
conventional dendritic cell | 4 studies | 29% ± 6% | |
glial cell | 4 studies | 33% ± 7% | |
mesothelial cell | 4 studies | 24% ± 5% | |
mast cell | 4 studies | 25% ± 7% | |
neuron | 4 studies | 33% ± 15% | |
GABAergic neuron | 4 studies | 30% ± 10% | |
pericyte | 4 studies | 24% ± 8% | |
mononuclear phagocyte | 3 studies | 20% ± 2% | |
Mueller cell | 3 studies | 42% ± 17% | |
pancreatic ductal cell | 3 studies | 49% ± 11% | |
neural progenitor cell | 3 studies | 29% ± 14% | |
ependymal cell | 3 studies | 42% ± 9% | |
adventitial cell | 3 studies | 22% ± 4% | |
capillary endothelial cell | 3 studies | 22% ± 2% | |
myofibroblast cell | 3 studies | 31% ± 9% | |
alveolar macrophage | 3 studies | 17% ± 3% | |
granule cell | 3 studies | 26% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 98% | 1893.29 | 2601 / 2642 | 99% | 16.18 | 698 / 705 |
kidney | 87% | 1090.96 | 77 / 89 | 91% | 17.13 | 818 / 901 |
lung | 99% | 2341.53 | 575 / 578 | 54% | 3.12 | 619 / 1155 |
thymus | 86% | 837.07 | 562 / 653 | 61% | 3.80 | 368 / 605 |
skin | 80% | 918.56 | 1455 / 1809 | 65% | 7.89 | 309 / 472 |
esophagus | 76% | 1158.32 | 1093 / 1445 | 69% | 5.25 | 127 / 183 |
uterus | 96% | 1609.21 | 164 / 170 | 47% | 3.18 | 216 / 459 |
breast | 100% | 2259.02 | 457 / 459 | 38% | 1.62 | 428 / 1118 |
pancreas | 57% | 553.36 | 186 / 328 | 60% | 2.61 | 107 / 178 |
intestine | 78% | 1211.43 | 754 / 966 | 34% | 1.45 | 177 / 527 |
bladder | 81% | 950.00 | 17 / 21 | 21% | 1.10 | 107 / 504 |
spleen | 100% | 2916.58 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 2742.05 | 1198 / 1204 | 0% | 0 | 0 / 0 |
heart | 97% | 1695.04 | 832 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 91% | 7862.75 | 847 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 90% | 1469.50 | 1201 / 1335 | 0% | 0 | 0 / 0 |
stomach | 50% | 529.86 | 178 / 359 | 35% | 1.42 | 100 / 286 |
ovary | 32% | 267.66 | 57 / 180 | 40% | 1.68 | 173 / 430 |
prostate | 58% | 538.32 | 142 / 245 | 4% | 0.12 | 19 / 502 |
adrenal gland | 11% | 75.68 | 29 / 258 | 50% | 4.04 | 114 / 230 |
muscle | 60% | 642.87 | 480 / 803 | 0% | 0 | 0 / 0 |
liver | 9% | 57.00 | 21 / 226 | 17% | 1.17 | 68 / 406 |
lymph node | 0% | 0 | 0 / 0 | 17% | 0.60 | 5 / 29 |
tonsil | 0% | 0 | 0 / 0 | 16% | 0.67 | 7 / 45 |
eye | 0% | 0 | 0 / 0 | 3% | 0.06 | 2 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0070062 | Cellular component | extracellular exosome |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0035497 | Molecular function | cAMP response element binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0005515 | Molecular function | protein binding |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0046872 | Molecular function | metal ion binding |
Gene name | CREB5 |
Protein name | cAMP responsive element binding protein 5 Alternative protein CREB5 Cyclic AMP-responsive element-binding protein 5 (CREB-5) (cAMP-responsive element-binding protein 5) (cAMP-response element-binding protein A) (CRE-BPa) |
Synonyms | CREBPA |
Description | FUNCTION: Binds to the cAMP response element and activates transcription. . |
Accessions | ENST00000396299.6 [Q02930-3] ENST00000498316.3 H9KVC5 L8ECP5 ENST00000424599.5 ENST00000396298.6 [Q02930-4] ENST00000396300.6 [Q02930-2] Q02930 C9JN33 ENST00000426500.5 H0YFV2 ENST00000357727.7 [Q02930-1] ENST00000409603.5 [Q02930-3] |