Name | Number of supported studies | Average coverage | |
---|---|---|---|
B cell | 13 studies | 21% ± 5% | |
memory B cell | 12 studies | 26% ± 7% | |
plasma cell | 11 studies | 30% ± 14% | |
glutamatergic neuron | 7 studies | 33% ± 18% | |
plasmablast | 6 studies | 40% ± 19% | |
oligodendrocyte precursor cell | 6 studies | 31% ± 10% | |
cardiac muscle cell | 5 studies | 33% ± 9% | |
endothelial cell of lymphatic vessel | 5 studies | 23% ± 4% | |
endothelial cell | 3 studies | 28% ± 9% | |
astrocyte | 3 studies | 19% ± 3% | |
germinal center B cell | 3 studies | 32% ± 8% | |
GABAergic neuron | 3 studies | 24% ± 5% | |
IgA plasma cell | 3 studies | 25% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 3 studies | 36% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 87% | 4700.13 | 2300 / 2642 | 99% | 43.08 | 701 / 705 |
uterus | 76% | 1336.44 | 130 / 170 | 59% | 3.49 | 270 / 459 |
intestine | 58% | 609.25 | 560 / 966 | 68% | 3.73 | 359 / 527 |
thymus | 42% | 366.91 | 273 / 653 | 71% | 3.98 | 427 / 605 |
lung | 30% | 214.60 | 171 / 578 | 78% | 5.10 | 905 / 1155 |
ovary | 55% | 795.08 | 99 / 180 | 46% | 2.53 | 197 / 430 |
lymph node | 0% | 0 | 0 / 0 | 100% | 55.15 | 29 / 29 |
spleen | 100% | 2706.17 | 240 / 241 | 0% | 0 | 0 / 0 |
kidney | 42% | 312.29 | 37 / 89 | 54% | 3.92 | 491 / 901 |
heart | 93% | 7242.15 | 804 / 861 | 0% | 0 | 0 / 0 |
skin | 5% | 28.48 | 93 / 1809 | 86% | 12.35 | 406 / 472 |
bladder | 38% | 319.33 | 8 / 21 | 52% | 2.41 | 262 / 504 |
stomach | 19% | 134.45 | 69 / 359 | 71% | 4.57 | 202 / 286 |
breast | 24% | 170.88 | 108 / 459 | 62% | 3.23 | 693 / 1118 |
esophagus | 15% | 94.32 | 215 / 1445 | 70% | 3.90 | 129 / 183 |
pancreas | 0% | 1.86 | 1 / 328 | 79% | 4.41 | 141 / 178 |
peripheral blood | 78% | 1704.02 | 724 / 929 | 0% | 0 | 0 / 0 |
prostate | 58% | 708.39 | 141 / 245 | 18% | 0.62 | 88 / 502 |
tonsil | 0% | 0 | 0 / 0 | 73% | 6.05 | 33 / 45 |
adrenal gland | 2% | 13.77 | 6 / 258 | 53% | 3.14 | 121 / 230 |
adipose | 49% | 476.82 | 589 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 25% | 1.35 | 20 / 80 |
liver | 0% | 0 | 0 / 226 | 14% | 0.67 | 58 / 406 |
blood vessel | 11% | 93.22 | 146 / 1335 | 0% | 0 | 0 / 0 |
muscle | 1% | 4.13 | 5 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1903861 | Biological process | positive regulation of dendrite extension |
GO_0030154 | Biological process | cell differentiation |
GO_0071277 | Biological process | cellular response to calcium ion |
GO_0043204 | Cellular component | perikaryon |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005886 | Cellular component | plasma membrane |
GO_0043005 | Cellular component | neuron projection |
GO_0005544 | Molecular function | calcium-dependent phospholipid binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | CPNE5 |
Protein name | Copine 5 Copine-5 (Copine V) |
Synonyms | KIAA1599 |
Description | FUNCTION: Probable calcium-dependent phospholipid-binding protein that may play a role in calcium-mediated intracellular processes (By similarity). Plays a role in dendrite formation by melanocytes . . |
Accessions | ENST00000244751.7 [Q9HCH3-1] A0A0J9YWA1 A0A0J9YWU8 Q9HCH3 ENST00000393189.2 [Q9HCH3-2] ENST00000633280.1 ENST00000633136.2 |